Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 BX842568.3-201ENST00000418104 571 ntBASIC22.49■■□□□ 1.19
PCDH15Q96QU1 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC22.49■■□□□ 1.19
PCDH15Q96QU1 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC22.49■■□□□ 1.19
PCDH15Q96QU1 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC22.49■■□□□ 1.19
PCDH15Q96QU1 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC22.49■■□□□ 1.19
PCDH15Q96QU1 AC233992.3-201ENST00000607491 485 ntBASIC22.49■■□□□ 1.19
PCDH15Q96QU1 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC22.49■■□□□ 1.19
PCDH15Q96QU1 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC22.48■■□□□ 1.19
PCDH15Q96QU1 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PCDH15Q96QU1 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC22.48■■□□□ 1.19
PCDH15Q96QU1 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDH15Q96QU1 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDH15Q96QU1 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC22.48■■□□□ 1.19
PCDH15Q96QU1 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PCDH15Q96QU1 MPST-208ENST00000628507 698 ntTSL 5 BASIC22.47■■□□□ 1.19
PCDH15Q96QU1 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDH15Q96QU1 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDH15Q96QU1 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDH15Q96QU1 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDH15Q96QU1 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDH15Q96QU1 AK1-201ENST00000223836 736 ntTSL 3 BASIC22.47■■□□□ 1.19
PCDH15Q96QU1 AC092437.1-201ENST00000624794 1048 ntBASIC22.47■■□□□ 1.19
PCDH15Q96QU1 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC22.46■■□□□ 1.19
PCDH15Q96QU1 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDH15Q96QU1 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC22.46■■□□□ 1.19
PCDH15Q96QU1 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDH15Q96QU1 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PCDH15Q96QU1 NKILA-201ENST00000613231 537 ntTSL 4 BASIC22.45■■□□□ 1.18
PCDH15Q96QU1 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC22.45■■□□□ 1.18
PCDH15Q96QU1 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDH15Q96QU1 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC22.45■■□□□ 1.18
PCDH15Q96QU1 SLC6A10P-202ENST00000431994 2058 ntBASIC22.45■■□□□ 1.18
PCDH15Q96QU1 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC22.45■■□□□ 1.18
PCDH15Q96QU1 DUX4L2-201ENST00000561772 1275 ntBASIC22.45■■□□□ 1.18
PCDH15Q96QU1 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC22.45■■□□□ 1.18
PCDH15Q96QU1 MIR6089-201ENST00000616698 64 ntBASIC22.45■■□□□ 1.18
PCDH15Q96QU1 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC22.45■■□□□ 1.18
PCDH15Q96QU1 DUX4L6-201ENST00000626483 1275 ntBASIC22.45■■□□□ 1.18
PCDH15Q96QU1 DUX4L1-201ENST00000627662 1275 ntBASIC22.45■■□□□ 1.18
PCDH15Q96QU1 DUX4L8-201ENST00000629013 1275 ntBASIC22.45■■□□□ 1.18
PCDH15Q96QU1 DUX4L3-201ENST00000630187 1275 ntBASIC22.45■■□□□ 1.18
PCDH15Q96QU1 DUX4L7-201ENST00000630678 1275 ntBASIC22.45■■□□□ 1.18
PCDH15Q96QU1 DUX4L5-201ENST00000630834 1275 ntBASIC22.45■■□□□ 1.18
PCDH15Q96QU1 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDH15Q96QU1 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
PCDH15Q96QU1 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDH15Q96QU1 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDH15Q96QU1 AC027612.3-201ENST00000413684 1047 ntBASIC22.44■■□□□ 1.18
PCDH15Q96QU1 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
PCDH15Q96QU1 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC22.44■■□□□ 1.18
PCDH15Q96QU1 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDH15Q96QU1 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC22.44■■□□□ 1.18
PCDH15Q96QU1 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
PCDH15Q96QU1 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDH15Q96QU1 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC22.43■■□□□ 1.18
PCDH15Q96QU1 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDH15Q96QU1 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDH15Q96QU1 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
PCDH15Q96QU1 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.43■■□□□ 1.18
PCDH15Q96QU1 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC22.43■■□□□ 1.18
PCDH15Q96QU1 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC22.43■■□□□ 1.18
PCDH15Q96QU1 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PCDH15Q96QU1 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDH15Q96QU1 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PCDH15Q96QU1 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PCDH15Q96QU1 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
PCDH15Q96QU1 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC22.42■■□□□ 1.18
PCDH15Q96QU1 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PCDH15Q96QU1 AC022517.1-201ENST00000592429 346 ntBASIC22.42■■□□□ 1.18
PCDH15Q96QU1 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC22.41■■□□□ 1.18
PCDH15Q96QU1 SLC47A1P1-202ENST00000449666 945 ntBASIC22.41■■□□□ 1.18
PCDH15Q96QU1 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC22.41■■□□□ 1.18
PCDH15Q96QU1 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDH15Q96QU1 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PCDH15Q96QU1 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDH15Q96QU1 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
PCDH15Q96QU1 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PCDH15Q96QU1 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC22.41■■□□□ 1.18
PCDH15Q96QU1 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
PCDH15Q96QU1 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC22.41■■□□□ 1.18
PCDH15Q96QU1 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDH15Q96QU1 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDH15Q96QU1 DUSP8P4-201ENST00000399538 1761 ntBASIC22.4■■□□□ 1.18
PCDH15Q96QU1 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDH15Q96QU1 GRAMD4P2-201ENST00000423297 1097 ntBASIC22.4■■□□□ 1.18
PCDH15Q96QU1 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDH15Q96QU1 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC22.4■■□□□ 1.18
PCDH15Q96QU1 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC22.4■■□□□ 1.18
PCDH15Q96QU1 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC22.4■■□□□ 1.18
PCDH15Q96QU1 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC22.4■■□□□ 1.18
PCDH15Q96QU1 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PCDH15Q96QU1 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDH15Q96QU1 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC22.39■■□□□ 1.18
PCDH15Q96QU1 YBX1P1-201ENST00000445822 960 ntBASIC22.39■■□□□ 1.18
PCDH15Q96QU1 MIR3181-201ENST00000578512 73 ntBASIC22.39■■□□□ 1.18
PCDH15Q96QU1 AC009086.3-201ENST00000623486 1008 ntBASIC22.39■■□□□ 1.18
PCDH15Q96QU1 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC22.39■■□□□ 1.18
PCDH15Q96QU1 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
PCDH15Q96QU1 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
PCDH15Q96QU1 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms