Protein–RNA interactions for Protein: Q96PB8

LRRC3B, Leucine-rich repeat-containing protein 3B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3BQ96PB8 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
LRRC3BQ96PB8 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
LRRC3BQ96PB8 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
LRRC3BQ96PB8 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.57■■□□□ 1.36
LRRC3BQ96PB8 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC23.57■■□□□ 1.36
LRRC3BQ96PB8 AC008764.7-201ENST00000593779 1081 ntBASIC23.57■■□□□ 1.36
LRRC3BQ96PB8 AL138724.1-201ENST00000606771 1088 ntBASIC23.57■■□□□ 1.36
LRRC3BQ96PB8 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
LRRC3BQ96PB8 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.57■■□□□ 1.36
LRRC3BQ96PB8 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
LRRC3BQ96PB8 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
LRRC3BQ96PB8 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
LRRC3BQ96PB8 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.57■■□□□ 1.36
LRRC3BQ96PB8 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
LRRC3BQ96PB8 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC23.56■■□□□ 1.36
LRRC3BQ96PB8 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.56■■□□□ 1.36
LRRC3BQ96PB8 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.56■■□□□ 1.36
LRRC3BQ96PB8 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.56■■□□□ 1.36
LRRC3BQ96PB8 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
LRRC3BQ96PB8 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.56■■□□□ 1.36
LRRC3BQ96PB8 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
LRRC3BQ96PB8 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC23.55■■□□□ 1.36
LRRC3BQ96PB8 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
LRRC3BQ96PB8 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.55■■□□□ 1.36
LRRC3BQ96PB8 MIR5787-201ENST00000611784 55 ntBASIC23.55■■□□□ 1.36
LRRC3BQ96PB8 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.55■■□□□ 1.36
LRRC3BQ96PB8 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.55■■□□□ 1.36
LRRC3BQ96PB8 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
LRRC3BQ96PB8 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC23.54■■□□□ 1.36
LRRC3BQ96PB8 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
LRRC3BQ96PB8 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
LRRC3BQ96PB8 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC23.54■■□□□ 1.36
LRRC3BQ96PB8 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
LRRC3BQ96PB8 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.54■■□□□ 1.36
LRRC3BQ96PB8 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
LRRC3BQ96PB8 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
LRRC3BQ96PB8 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
LRRC3BQ96PB8 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
LRRC3BQ96PB8 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
LRRC3BQ96PB8 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
LRRC3BQ96PB8 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
LRRC3BQ96PB8 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
LRRC3BQ96PB8 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC23.53■■□□□ 1.36
LRRC3BQ96PB8 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.53■■□□□ 1.36
LRRC3BQ96PB8 MIR6821-201ENST00000617625 74 ntBASIC23.53■■□□□ 1.36
LRRC3BQ96PB8 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
LRRC3BQ96PB8 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
LRRC3BQ96PB8 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.53■■□□□ 1.36
LRRC3BQ96PB8 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
LRRC3BQ96PB8 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
LRRC3BQ96PB8 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
LRRC3BQ96PB8 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
LRRC3BQ96PB8 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
LRRC3BQ96PB8 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.52■■□□□ 1.36
LRRC3BQ96PB8 AC099791.1-201ENST00000416440 715 ntBASIC23.52■■□□□ 1.36
LRRC3BQ96PB8 AC027682.1-201ENST00000562846 899 ntBASIC23.52■■□□□ 1.36
LRRC3BQ96PB8 MIR3181-201ENST00000578512 73 ntBASIC23.52■■□□□ 1.36
LRRC3BQ96PB8 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.52■■□□□ 1.36
LRRC3BQ96PB8 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.52■■□□□ 1.36
LRRC3BQ96PB8 AC136469.2-201ENST00000623944 1028 ntBASIC23.52■■□□□ 1.36
LRRC3BQ96PB8 AC241377.3-202ENST00000626088 1088 ntBASIC23.52■■□□□ 1.36
LRRC3BQ96PB8 AC241585.3-202ENST00000628937 1088 ntBASIC23.52■■□□□ 1.36
LRRC3BQ96PB8 AC245100.8-202ENST00000629247 1058 ntBASIC23.52■■□□□ 1.36
LRRC3BQ96PB8 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.52■■□□□ 1.36
LRRC3BQ96PB8 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
LRRC3BQ96PB8 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
LRRC3BQ96PB8 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.52■■□□□ 1.36
LRRC3BQ96PB8 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.51■■□□□ 1.35
LRRC3BQ96PB8 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
LRRC3BQ96PB8 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
LRRC3BQ96PB8 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
LRRC3BQ96PB8 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
LRRC3BQ96PB8 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
LRRC3BQ96PB8 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
LRRC3BQ96PB8 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
LRRC3BQ96PB8 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
LRRC3BQ96PB8 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
LRRC3BQ96PB8 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC23.51■■□□□ 1.35
LRRC3BQ96PB8 AC087623.3-201ENST00000607047 1098 ntBASIC23.51■■□□□ 1.35
LRRC3BQ96PB8 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
LRRC3BQ96PB8 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
LRRC3BQ96PB8 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
LRRC3BQ96PB8 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
LRRC3BQ96PB8 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.51■■□□□ 1.35
LRRC3BQ96PB8 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC23.5■■□□□ 1.35
LRRC3BQ96PB8 AC097381.1-201ENST00000429019 1296 ntBASIC23.5■■□□□ 1.35
LRRC3BQ96PB8 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.5■■□□□ 1.35
LRRC3BQ96PB8 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
LRRC3BQ96PB8 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.5■■□□□ 1.35
LRRC3BQ96PB8 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
LRRC3BQ96PB8 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.5■■□□□ 1.35
LRRC3BQ96PB8 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
LRRC3BQ96PB8 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
LRRC3BQ96PB8 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
LRRC3BQ96PB8 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
LRRC3BQ96PB8 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC23.49■■□□□ 1.35
LRRC3BQ96PB8 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
LRRC3BQ96PB8 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
LRRC3BQ96PB8 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.49■■□□□ 1.35
LRRC3BQ96PB8 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms