Protein–RNA interactions for Protein: Q8TE82

SH3TC1, SH3 domain and tetratricopeptide repeat-containing protein 1, humanhuman

Predictions only

Length 1,336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1Q8TE82 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
SH3TC1Q8TE82 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC28.63■■■□□ 2.17
SH3TC1Q8TE82 HLA-L-211ENST00000482052 1765 ntBASIC28.63■■■□□ 2.17
SH3TC1Q8TE82 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
SH3TC1Q8TE82 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC28.63■■■□□ 2.17
SH3TC1Q8TE82 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC28.63■■■□□ 2.17
SH3TC1Q8TE82 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
SH3TC1Q8TE82 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
SH3TC1Q8TE82 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
SH3TC1Q8TE82 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC28.62■■■□□ 2.17
SH3TC1Q8TE82 AL161729.1-201ENST00000604104 1402 ntBASIC28.62■■■□□ 2.17
SH3TC1Q8TE82 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
SH3TC1Q8TE82 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
SH3TC1Q8TE82 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
SH3TC1Q8TE82 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
SH3TC1Q8TE82 AC091305.1-201ENST00000479476 895 ntBASIC28.61■■■□□ 2.17
SH3TC1Q8TE82 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC28.61■■■□□ 2.17
SH3TC1Q8TE82 AL138724.1-201ENST00000606771 1088 ntBASIC28.61■■■□□ 2.17
SH3TC1Q8TE82 AC011298.3-201ENST00000615796 283 ntBASIC28.61■■■□□ 2.17
SH3TC1Q8TE82 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
SH3TC1Q8TE82 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC28.61■■■□□ 2.17
SH3TC1Q8TE82 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
SH3TC1Q8TE82 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
SH3TC1Q8TE82 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC28.6■■■□□ 2.17
SH3TC1Q8TE82 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC28.6■■■□□ 2.17
SH3TC1Q8TE82 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
SH3TC1Q8TE82 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC28.6■■■□□ 2.17
SH3TC1Q8TE82 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
SH3TC1Q8TE82 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC28.6■■■□□ 2.17
SH3TC1Q8TE82 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC28.6■■■□□ 2.17
SH3TC1Q8TE82 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC28.6■■■□□ 2.17
SH3TC1Q8TE82 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC28.59■■■□□ 2.17
SH3TC1Q8TE82 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC28.59■■■□□ 2.17
SH3TC1Q8TE82 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC28.59■■■□□ 2.17
SH3TC1Q8TE82 AC026271.2-201ENST00000428091 497 ntBASIC28.59■■■□□ 2.17
SH3TC1Q8TE82 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
SH3TC1Q8TE82 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC28.59■■■□□ 2.17
SH3TC1Q8TE82 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC28.58■■■□□ 2.17
SH3TC1Q8TE82 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC28.58■■■□□ 2.17
SH3TC1Q8TE82 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
SH3TC1Q8TE82 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC28.58■■■□□ 2.17
SH3TC1Q8TE82 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC28.58■■■□□ 2.17
SH3TC1Q8TE82 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC28.58■■■□□ 2.17
SH3TC1Q8TE82 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
SH3TC1Q8TE82 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
SH3TC1Q8TE82 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC28.58■■■□□ 2.16
SH3TC1Q8TE82 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC28.57■■■□□ 2.16
SH3TC1Q8TE82 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC28.57■■■□□ 2.16
SH3TC1Q8TE82 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC28.57■■■□□ 2.16
SH3TC1Q8TE82 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC28.57■■■□□ 2.16
SH3TC1Q8TE82 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC28.57■■■□□ 2.16
SH3TC1Q8TE82 AC241377.3-202ENST00000626088 1088 ntBASIC28.57■■■□□ 2.16
SH3TC1Q8TE82 AC241585.3-202ENST00000628937 1088 ntBASIC28.57■■■□□ 2.16
SH3TC1Q8TE82 AC245100.8-202ENST00000629247 1058 ntBASIC28.57■■■□□ 2.16
SH3TC1Q8TE82 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC28.57■■■□□ 2.16
SH3TC1Q8TE82 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
SH3TC1Q8TE82 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC28.57■■■□□ 2.16
SH3TC1Q8TE82 AC020928.2-201ENST00000588717 2197 ntBASIC28.57■■■□□ 2.16
SH3TC1Q8TE82 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
SH3TC1Q8TE82 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC28.56■■■□□ 2.16
SH3TC1Q8TE82 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC28.56■■■□□ 2.16
SH3TC1Q8TE82 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC28.56■■■□□ 2.16
SH3TC1Q8TE82 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
SH3TC1Q8TE82 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
SH3TC1Q8TE82 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
SH3TC1Q8TE82 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC28.56■■■□□ 2.16
SH3TC1Q8TE82 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
SH3TC1Q8TE82 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
SH3TC1Q8TE82 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
SH3TC1Q8TE82 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC28.55■■■□□ 2.16
SH3TC1Q8TE82 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
SH3TC1Q8TE82 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC28.55■■■□□ 2.16
SH3TC1Q8TE82 MAG-206ENST00000597035 542 ntTSL 4 BASIC28.55■■■□□ 2.16
SH3TC1Q8TE82 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC28.55■■■□□ 2.16
SH3TC1Q8TE82 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
SH3TC1Q8TE82 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC28.54■■■□□ 2.16
SH3TC1Q8TE82 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
SH3TC1Q8TE82 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC28.54■■■□□ 2.16
SH3TC1Q8TE82 RASA4CP-201ENST00000424092 1398 ntBASIC28.54■■■□□ 2.16
SH3TC1Q8TE82 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
SH3TC1Q8TE82 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC28.53■■■□□ 2.16
SH3TC1Q8TE82 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC28.53■■■□□ 2.16
SH3TC1Q8TE82 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC28.53■■■□□ 2.16
SH3TC1Q8TE82 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
SH3TC1Q8TE82 AC006455.2-201ENST00000429931 906 ntBASIC28.53■■■□□ 2.16
SH3TC1Q8TE82 STOX2-205ENST00000513034 807 ntTSL 3 BASIC28.53■■■□□ 2.16
SH3TC1Q8TE82 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
SH3TC1Q8TE82 CA15P2-201ENST00000611168 834 ntBASIC28.53■■■□□ 2.16
SH3TC1Q8TE82 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC28.53■■■□□ 2.16
SH3TC1Q8TE82 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
SH3TC1Q8TE82 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
SH3TC1Q8TE82 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC28.52■■■□□ 2.16
SH3TC1Q8TE82 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC28.52■■■□□ 2.16
SH3TC1Q8TE82 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC28.52■■■□□ 2.16
SH3TC1Q8TE82 AC027682.1-201ENST00000562846 899 ntBASIC28.52■■■□□ 2.16
SH3TC1Q8TE82 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC28.52■■■□□ 2.16
SH3TC1Q8TE82 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
SH3TC1Q8TE82 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
SH3TC1Q8TE82 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.16
SH3TC1Q8TE82 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC28.51■■■□□ 2.16
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms