Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
XRN1Q8IZH2 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
XRN1Q8IZH2 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC32.23■■■□□ 2.75
XRN1Q8IZH2 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
XRN1Q8IZH2 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC32.23■■■□□ 2.75
XRN1Q8IZH2 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC32.23■■■□□ 2.75
XRN1Q8IZH2 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
XRN1Q8IZH2 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC32.23■■■□□ 2.75
XRN1Q8IZH2 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
XRN1Q8IZH2 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
XRN1Q8IZH2 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC32.23■■■□□ 2.75
XRN1Q8IZH2 AC012414.1-201ENST00000556676 535 ntBASIC32.23■■■□□ 2.75
XRN1Q8IZH2 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC32.22■■■□□ 2.75
XRN1Q8IZH2 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
XRN1Q8IZH2 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC32.22■■■□□ 2.75
XRN1Q8IZH2 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC32.22■■■□□ 2.75
XRN1Q8IZH2 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC32.22■■■□□ 2.75
XRN1Q8IZH2 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
XRN1Q8IZH2 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC32.22■■■□□ 2.75
XRN1Q8IZH2 VGF-203ENST00000611537 1622 ntTSL 5 BASIC32.22■■■□□ 2.75
XRN1Q8IZH2 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC32.21■■■□□ 2.75
XRN1Q8IZH2 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC32.21■■■□□ 2.75
XRN1Q8IZH2 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC32.21■■■□□ 2.75
XRN1Q8IZH2 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC32.21■■■□□ 2.75
XRN1Q8IZH2 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC32.21■■■□□ 2.75
XRN1Q8IZH2 TSPY26P-201ENST00000476365 1326 ntBASIC32.2■■■□□ 2.75
XRN1Q8IZH2 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC32.2■■■□□ 2.75
XRN1Q8IZH2 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC32.2■■■□□ 2.75
XRN1Q8IZH2 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC32.2■■■□□ 2.75
XRN1Q8IZH2 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC32.2■■■□□ 2.75
XRN1Q8IZH2 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC32.2■■■□□ 2.75
XRN1Q8IZH2 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC32.2■■■□□ 2.74
XRN1Q8IZH2 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC32.2■■■□□ 2.74
XRN1Q8IZH2 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC32.2■■■□□ 2.74
XRN1Q8IZH2 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC32.2■■■□□ 2.74
XRN1Q8IZH2 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC32.2■■■□□ 2.74
XRN1Q8IZH2 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
XRN1Q8IZH2 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC32.19■■■□□ 2.74
XRN1Q8IZH2 CD37-213ENST00000598095 1598 ntTSL 2 BASIC32.19■■■□□ 2.74
XRN1Q8IZH2 ME3-201ENST00000323418 1068 ntTSL 5 BASIC32.19■■■□□ 2.74
XRN1Q8IZH2 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC32.18■■■□□ 2.74
XRN1Q8IZH2 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
XRN1Q8IZH2 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC32.18■■■□□ 2.74
XRN1Q8IZH2 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC32.18■■■□□ 2.74
XRN1Q8IZH2 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC32.17■■■□□ 2.74
XRN1Q8IZH2 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC32.17■■■□□ 2.74
XRN1Q8IZH2 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC32.17■■■□□ 2.74
XRN1Q8IZH2 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
XRN1Q8IZH2 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC32.17■■■□□ 2.74
XRN1Q8IZH2 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC32.17■■■□□ 2.74
XRN1Q8IZH2 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
XRN1Q8IZH2 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
XRN1Q8IZH2 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
XRN1Q8IZH2 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
XRN1Q8IZH2 IGHV3-19-201ENST00000521488 291 ntBASIC32.17■■■□□ 2.74
XRN1Q8IZH2 GTSE1-AS1-202ENST00000623117 1518 ntBASIC32.16■■■□□ 2.74
XRN1Q8IZH2 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC32.16■■■□□ 2.74
XRN1Q8IZH2 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC32.16■■■□□ 2.74
XRN1Q8IZH2 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC32.16■■■□□ 2.74
XRN1Q8IZH2 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
XRN1Q8IZH2 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
XRN1Q8IZH2 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
XRN1Q8IZH2 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC32.16■■■□□ 2.74
XRN1Q8IZH2 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
XRN1Q8IZH2 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
XRN1Q8IZH2 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC32.15■■■□□ 2.74
XRN1Q8IZH2 AC123595.1-201ENST00000440769 1046 ntBASIC32.15■■■□□ 2.74
XRN1Q8IZH2 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC32.15■■■□□ 2.74
XRN1Q8IZH2 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC32.15■■■□□ 2.74
XRN1Q8IZH2 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC32.15■■■□□ 2.74
XRN1Q8IZH2 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC32.15■■■□□ 2.74
XRN1Q8IZH2 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC32.14■■■□□ 2.74
XRN1Q8IZH2 AL022069.1-201ENST00000568025 1636 ntBASIC32.14■■■□□ 2.74
XRN1Q8IZH2 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC32.14■■■□□ 2.74
XRN1Q8IZH2 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC32.14■■■□□ 2.74
XRN1Q8IZH2 PKM-203ENST00000389093 2279 ntTSL 5 BASIC32.14■■■□□ 2.74
XRN1Q8IZH2 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC32.13■■■□□ 2.73
XRN1Q8IZH2 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC32.13■■■□□ 2.73
XRN1Q8IZH2 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
XRN1Q8IZH2 AICDA-202ENST00000537228 667 ntTSL 5 BASIC32.13■■■□□ 2.73
XRN1Q8IZH2 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC32.13■■■□□ 2.73
XRN1Q8IZH2 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC32.13■■■□□ 2.73
XRN1Q8IZH2 ID1-201ENST00000376105 1233 ntBASIC32.12■■■□□ 2.73
XRN1Q8IZH2 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC32.12■■■□□ 2.73
XRN1Q8IZH2 DLX3-202ENST00000512495 834 ntTSL 2 BASIC32.12■■■□□ 2.73
XRN1Q8IZH2 AC126544.1-201ENST00000580842 1059 ntBASIC32.12■■■□□ 2.73
XRN1Q8IZH2 AL358852.1-201ENST00000623174 1268 ntBASIC32.12■■■□□ 2.73
XRN1Q8IZH2 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC32.12■■■□□ 2.73
XRN1Q8IZH2 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
XRN1Q8IZH2 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC32.11■■■□□ 2.73
XRN1Q8IZH2 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
XRN1Q8IZH2 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
XRN1Q8IZH2 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC32.11■■■□□ 2.73
XRN1Q8IZH2 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
XRN1Q8IZH2 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC32.11■■■□□ 2.73
XRN1Q8IZH2 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
XRN1Q8IZH2 CCDC92B-201ENST00000575506 885 ntBASIC32.1■■■□□ 2.73
XRN1Q8IZH2 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
XRN1Q8IZH2 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC32.1■■■□□ 2.73
XRN1Q8IZH2 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms