Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTCHD4Q6ZW05 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTCHD4Q6ZW05 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PTCHD4Q6ZW05 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.86■□□□□ 0.93
PTCHD4Q6ZW05 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PTCHD4Q6ZW05 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
PTCHD4Q6ZW05 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.86■□□□□ 0.93
PTCHD4Q6ZW05 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PTCHD4Q6ZW05 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
PTCHD4Q6ZW05 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
PTCHD4Q6ZW05 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
PTCHD4Q6ZW05 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
PTCHD4Q6ZW05 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.85■□□□□ 0.93
PTCHD4Q6ZW05 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
PTCHD4Q6ZW05 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PTCHD4Q6ZW05 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.85■□□□□ 0.93
PTCHD4Q6ZW05 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
PTCHD4Q6ZW05 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.85■□□□□ 0.93
PTCHD4Q6ZW05 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PTCHD4Q6ZW05 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PTCHD4Q6ZW05 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
PTCHD4Q6ZW05 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.85■□□□□ 0.93
PTCHD4Q6ZW05 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PTCHD4Q6ZW05 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.85■□□□□ 0.93
PTCHD4Q6ZW05 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PTCHD4Q6ZW05 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PTCHD4Q6ZW05 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PTCHD4Q6ZW05 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PTCHD4Q6ZW05 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.84■□□□□ 0.93
PTCHD4Q6ZW05 RPS2P7-201ENST00000447334 885 ntBASIC20.84■□□□□ 0.93
PTCHD4Q6ZW05 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.84■□□□□ 0.93
PTCHD4Q6ZW05 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.84■□□□□ 0.93
PTCHD4Q6ZW05 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PTCHD4Q6ZW05 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
PTCHD4Q6ZW05 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PTCHD4Q6ZW05 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTCHD4Q6ZW05 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.84■□□□□ 0.93
PTCHD4Q6ZW05 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTCHD4Q6ZW05 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
PTCHD4Q6ZW05 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTCHD4Q6ZW05 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTCHD4Q6ZW05 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PTCHD4Q6ZW05 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PTCHD4Q6ZW05 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
PTCHD4Q6ZW05 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTCHD4Q6ZW05 RARRES2P2-201ENST00000394842 485 ntBASIC20.83■□□□□ 0.93
PTCHD4Q6ZW05 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
PTCHD4Q6ZW05 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
PTCHD4Q6ZW05 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTCHD4Q6ZW05 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
PTCHD4Q6ZW05 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.83■□□□□ 0.92
PTCHD4Q6ZW05 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.83■□□□□ 0.92
PTCHD4Q6ZW05 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTCHD4Q6ZW05 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
PTCHD4Q6ZW05 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTCHD4Q6ZW05 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.82■□□□□ 0.92
PTCHD4Q6ZW05 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTCHD4Q6ZW05 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
PTCHD4Q6ZW05 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.82■□□□□ 0.92
PTCHD4Q6ZW05 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
PTCHD4Q6ZW05 AC018755.3-202ENST00000596210 929 ntBASIC20.82■□□□□ 0.92
PTCHD4Q6ZW05 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTCHD4Q6ZW05 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTCHD4Q6ZW05 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.82■□□□□ 0.92
PTCHD4Q6ZW05 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTCHD4Q6ZW05 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTCHD4Q6ZW05 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTCHD4Q6ZW05 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PTCHD4Q6ZW05 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
PTCHD4Q6ZW05 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.82■□□□□ 0.92
PTCHD4Q6ZW05 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PTCHD4Q6ZW05 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
PTCHD4Q6ZW05 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.81■□□□□ 0.92
PTCHD4Q6ZW05 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTCHD4Q6ZW05 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTCHD4Q6ZW05 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
PTCHD4Q6ZW05 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTCHD4Q6ZW05 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTCHD4Q6ZW05 LINC00565-201ENST00000562710 2331 ntBASIC20.81■□□□□ 0.92
PTCHD4Q6ZW05 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTCHD4Q6ZW05 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTCHD4Q6ZW05 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTCHD4Q6ZW05 DUSP8P3-201ENST00000399571 1760 ntBASIC20.8■□□□□ 0.92
PTCHD4Q6ZW05 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
PTCHD4Q6ZW05 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PTCHD4Q6ZW05 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.8■□□□□ 0.92
PTCHD4Q6ZW05 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTCHD4Q6ZW05 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
PTCHD4Q6ZW05 DUX4L9-201ENST00000449051 1259 ntBASIC20.8■□□□□ 0.92
PTCHD4Q6ZW05 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.8■□□□□ 0.92
PTCHD4Q6ZW05 HSD17B1P1-201ENST00000590052 955 ntBASIC20.8■□□□□ 0.92
PTCHD4Q6ZW05 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTCHD4Q6ZW05 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
PTCHD4Q6ZW05 C1orf229-201ENST00000623686 2258 ntBASIC20.8■□□□□ 0.92
PTCHD4Q6ZW05 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
PTCHD4Q6ZW05 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.79■□□□□ 0.92
PTCHD4Q6ZW05 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTCHD4Q6ZW05 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTCHD4Q6ZW05 AC092068.2-201ENST00000590491 1708 ntBASIC20.79■□□□□ 0.92
PTCHD4Q6ZW05 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms