Protein–RNA interactions for Protein: Q3BBW0

NBPF9, Neuroblastoma breakpoint family member 9, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF9Q3BBW0 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC27.36■■□□□ 1.97
NBPF9Q3BBW0 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
NBPF9Q3BBW0 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
NBPF9Q3BBW0 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
NBPF9Q3BBW0 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
NBPF9Q3BBW0 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC27.35■■□□□ 1.97
NBPF9Q3BBW0 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
NBPF9Q3BBW0 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC27.35■■□□□ 1.97
NBPF9Q3BBW0 AC009086.3-201ENST00000623486 1008 ntBASIC27.35■■□□□ 1.97
NBPF9Q3BBW0 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
NBPF9Q3BBW0 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
NBPF9Q3BBW0 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC27.34■■□□□ 1.97
NBPF9Q3BBW0 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC27.34■■□□□ 1.97
NBPF9Q3BBW0 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC27.34■■□□□ 1.97
NBPF9Q3BBW0 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
NBPF9Q3BBW0 HACD1-201ENST00000326961 773 ntTSL 2 BASIC27.34■■□□□ 1.97
NBPF9Q3BBW0 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
NBPF9Q3BBW0 MIR6089-201ENST00000616698 64 ntBASIC27.34■■□□□ 1.97
NBPF9Q3BBW0 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC27.34■■□□□ 1.97
NBPF9Q3BBW0 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
NBPF9Q3BBW0 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
NBPF9Q3BBW0 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC27.33■■□□□ 1.97
NBPF9Q3BBW0 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
NBPF9Q3BBW0 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
NBPF9Q3BBW0 AC090192.1-201ENST00000517740 490 ntBASIC27.33■■□□□ 1.97
NBPF9Q3BBW0 AL031602.1-201ENST00000633169 911 ntBASIC27.33■■□□□ 1.97
NBPF9Q3BBW0 RARRES2P11-201ENST00000635158 484 ntBASIC27.33■■□□□ 1.97
NBPF9Q3BBW0 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC27.33■■□□□ 1.97
NBPF9Q3BBW0 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC27.33■■□□□ 1.97
NBPF9Q3BBW0 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
NBPF9Q3BBW0 AK1-201ENST00000223836 736 ntTSL 3 BASIC27.32■■□□□ 1.96
NBPF9Q3BBW0 SNX3-202ENST00000349379 890 ntTSL 2 BASIC27.32■■□□□ 1.96
NBPF9Q3BBW0 ASB1-202ENST00000409297 878 ntTSL 5 BASIC27.32■■□□□ 1.96
NBPF9Q3BBW0 NKILA-201ENST00000613231 537 ntTSL 4 BASIC27.32■■□□□ 1.96
NBPF9Q3BBW0 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
NBPF9Q3BBW0 AC034268.1-201ENST00000441047 882 ntBASIC27.31■■□□□ 1.96
NBPF9Q3BBW0 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
NBPF9Q3BBW0 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC27.31■■□□□ 1.96
NBPF9Q3BBW0 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
NBPF9Q3BBW0 AC022517.1-201ENST00000592429 346 ntBASIC27.31■■□□□ 1.96
NBPF9Q3BBW0 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC27.31■■□□□ 1.96
NBPF9Q3BBW0 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC27.31■■□□□ 1.96
NBPF9Q3BBW0 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
NBPF9Q3BBW0 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC27.3■■□□□ 1.96
NBPF9Q3BBW0 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC27.3■■□□□ 1.96
NBPF9Q3BBW0 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC27.3■■□□□ 1.96
NBPF9Q3BBW0 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
NBPF9Q3BBW0 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC27.3■■□□□ 1.96
NBPF9Q3BBW0 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
NBPF9Q3BBW0 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
NBPF9Q3BBW0 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
NBPF9Q3BBW0 VGF-203ENST00000611537 1622 ntTSL 5 BASIC27.3■■□□□ 1.96
NBPF9Q3BBW0 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
NBPF9Q3BBW0 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC27.29■■□□□ 1.96
NBPF9Q3BBW0 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC27.29■■□□□ 1.96
NBPF9Q3BBW0 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC27.29■■□□□ 1.96
NBPF9Q3BBW0 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
NBPF9Q3BBW0 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC27.29■■□□□ 1.96
NBPF9Q3BBW0 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
NBPF9Q3BBW0 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
NBPF9Q3BBW0 LSR-205ENST00000427250 1606 ntTSL 2 BASIC27.28■■□□□ 1.96
NBPF9Q3BBW0 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC27.28■■□□□ 1.96
NBPF9Q3BBW0 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC27.28■■□□□ 1.96
NBPF9Q3BBW0 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
NBPF9Q3BBW0 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
NBPF9Q3BBW0 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC27.28■■□□□ 1.96
NBPF9Q3BBW0 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
NBPF9Q3BBW0 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
NBPF9Q3BBW0 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
NBPF9Q3BBW0 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC27.27■■□□□ 1.96
NBPF9Q3BBW0 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
NBPF9Q3BBW0 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
NBPF9Q3BBW0 KRT18P5-201ENST00000436075 1291 ntBASIC27.27■■□□□ 1.96
NBPF9Q3BBW0 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
NBPF9Q3BBW0 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC27.27■■□□□ 1.96
NBPF9Q3BBW0 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.96
NBPF9Q3BBW0 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC27.26■■□□□ 1.95
NBPF9Q3BBW0 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC27.26■■□□□ 1.95
NBPF9Q3BBW0 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC27.26■■□□□ 1.95
NBPF9Q3BBW0 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC27.26■■□□□ 1.95
NBPF9Q3BBW0 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
NBPF9Q3BBW0 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
NBPF9Q3BBW0 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
NBPF9Q3BBW0 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
NBPF9Q3BBW0 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC27.25■■□□□ 1.95
NBPF9Q3BBW0 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC27.25■■□□□ 1.95
NBPF9Q3BBW0 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC27.25■■□□□ 1.95
NBPF9Q3BBW0 AC126544.1-201ENST00000580842 1059 ntBASIC27.25■■□□□ 1.95
NBPF9Q3BBW0 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC27.25■■□□□ 1.95
NBPF9Q3BBW0 pRNA.6-201ENST00000610482 90 ntBASIC27.25■■□□□ 1.95
NBPF9Q3BBW0 pRNA.5-201ENST00000612139 90 ntBASIC27.25■■□□□ 1.95
NBPF9Q3BBW0 pRNA.11-201ENST00000618423 90 ntBASIC27.25■■□□□ 1.95
NBPF9Q3BBW0 pRNA.13-201ENST00000619112 90 ntBASIC27.25■■□□□ 1.95
NBPF9Q3BBW0 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
NBPF9Q3BBW0 AL121749.1-202ENST00000609313 2153 ntBASIC27.24■■□□□ 1.95
NBPF9Q3BBW0 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC27.24■■□□□ 1.95
NBPF9Q3BBW0 GTSE1-AS1-202ENST00000623117 1518 ntBASIC27.24■■□□□ 1.95
NBPF9Q3BBW0 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC27.24■■□□□ 1.95
NBPF9Q3BBW0 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
NBPF9Q3BBW0 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms