Protein–RNA interactions for Protein: Q08285

RRP40, Exosome complex component RRP40, yeastyeast

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP40Q08285 RMR1YGL250W 726 nt4.46□□□□□ -1.7
RRP40Q08285 PCT1YGR202C 1275 nt4.46□□□□□ -1.7
RRP40Q08285 YHR193C-AYHR193C-A 375 nt4.46□□□□□ -1.7
RRP40Q08285 KRE6YPR159W 2163 nt4.46□□□□□ -1.7
RRP40Q08285 ATM1YMR301C 2073 nt4.45□□□□□ -1.7
RRP40Q08285 RAD30YDR419W 1899 nt4.45□□□□□ -1.7
RRP40Q08285 CRT10YOL063C 2874 nt4.45□□□□□ -1.7
RRP40Q08285 YEL067CYEL067C 588 nt4.45□□□□□ -1.7
RRP40Q08285 KRE9YJL174W 831 nt4.45□□□□□ -1.7
RRP40Q08285 AIF1YNR074C 1137 nt4.45□□□□□ -1.7
RRP40Q08285 UBA3YPR066W 900 nt4.45□□□□□ -1.7
RRP40Q08285 SWI3YJL176C 2478 nt4.45□□□□□ -1.7
RRP40Q08285 KAR2YJL034W 2049 nt4.45□□□□□ -1.7
RRP40Q08285 YHL049CYHL049C 816 nt4.44□□□□□ -1.7
RRP40Q08285 YKL023WYKL023W 834 nt4.44□□□□□ -1.7
RRP40Q08285 CDC28YBR160W 897 nt4.44□□□□□ -1.7
RRP40Q08285 MNT2YGL257C 1677 nt4.44□□□□□ -1.7
RRP40Q08285 SRV2YNL138W 1581 nt4.44□□□□□ -1.7
RRP40Q08285 SYP1YCR030C 2613 nt4.43□□□□□ -1.7
RRP40Q08285 HRK1YOR267C 2280 nt4.43□□□□□ -1.7
RRP40Q08285 VHC1YBR235W 3363 nt4.43□□□□□ -1.7
RRP40Q08285 ASP1YDR321W 1146 nt4.43□□□□□ -1.7
RRP40Q08285 CSR1YLR380W 1227 nt4.43□□□□□ -1.7
RRP40Q08285 YBL006W-AYBL006W-A 150 nt4.43□□□□□ -1.7
RRP40Q08285 YMR030W-AYMR030W-A 291 nt4.43□□□□□ -1.7
RRP40Q08285 SLZ1YNL196C 897 nt4.43□□□□□ -1.7
RRP40Q08285 SCP1YOR367W 603 nt4.43□□□□□ -1.7
RRP40Q08285 YPR169W-AYPR169W-A 219 nt4.43□□□□□ -1.7
RRP40Q08285 YPR170W-BYPR170W-B 258 nt4.43□□□□□ -1.7
RRP40Q08285 SAC1YKL212W 1872 nt4.43□□□□□ -1.7
RRP40Q08285 YDR261C-DYDR261C-D 4815 nt4.43□□□□□ -1.7
RRP40Q08285 YEF1YEL041W 1488 nt4.43□□□□□ -1.7
RRP40Q08285 KRS1YDR037W 1776 nt4.42□□□□□ -1.7
RRP40Q08285 SUP35YDR172W 2058 nt4.42□□□□□ -1.7
RRP40Q08285 LPL1YOR059C 1353 nt4.42□□□□□ -1.7
RRP40Q08285 APE1YKL103C 1545 nt4.42□□□□□ -1.7
RRP40Q08285 MPH2YDL247W 1830 nt4.42□□□□□ -1.7
RRP40Q08285 APC4YDR118W 1959 nt4.42□□□□□ -1.7
RRP40Q08285 SUT1YGL162W 900 nt4.42□□□□□ -1.7
RRP40Q08285 HOT1YMR172W 2160 nt4.42□□□□□ -1.7
RRP40Q08285 COG5YNL051W 1212 nt4.42□□□□□ -1.7
RRP40Q08285 ATG14YBR128C 1035 nt4.42□□□□□ -1.7
RRP40Q08285 MPP10YJR002W 1782 nt4.42□□□□□ -1.7
RRP40Q08285 FRS1YLR060W 1788 nt4.42□□□□□ -1.7
RRP40Q08285 YGR266WYGR266W 2106 nt4.42□□□□□ -1.7
RRP40Q08285 LAS21YJL062W 2493 nt4.41□□□□□ -1.7
RRP40Q08285 FHL1YPR104C 2811 nt4.41□□□□□ -1.7
RRP40Q08285 LHP1YDL051W 828 nt4.41□□□□□ -1.7
RRP40Q08285 RSM10YDR041W 612 nt4.41□□□□□ -1.7
RRP40Q08285 SKI6YGR195W 741 nt4.41□□□□□ -1.7
RRP40Q08285 RPL43BYJR094W-A 279 nt4.41□□□□□ -1.7
RRP40Q08285 MID2YLR332W 1131 nt4.41□□□□□ -1.7
RRP40Q08285 GSP2YOR185C 663 nt4.41□□□□□ -1.7
RRP40Q08285 YCL012CYCL012C 405 nt4.41□□□□□ -1.7
RRP40Q08285 YCL021W-AYCL021W-A 378 nt4.41□□□□□ -1.7
RRP40Q08285 RVB1YDR190C 1392 nt4.4□□□□□ -1.7
RRP40Q08285 GDE1YPL110C 3672 nt4.4□□□□□ -1.7
RRP40Q08285 ARF2YDL137W 546 nt4.4□□□□□ -1.71
RRP40Q08285 UPS3YDR185C 540 nt4.4□□□□□ -1.71
RRP40Q08285 HSP31YDR533C 714 nt4.4□□□□□ -1.71
RRP40Q08285 YLF2YHL014C 1218 nt4.4□□□□□ -1.71
RRP40Q08285 SAP30YMR263W 606 nt4.4□□□□□ -1.71
RRP40Q08285 snR19snR19 568 nt4.4□□□□□ -1.71
RRP40Q08285 TRM44YPL030W 1704 nt4.4□□□□□ -1.71
RRP40Q08285 TUB3YML124C 1338 nt4.4□□□□□ -1.71
RRP40Q08285 SAP155YFR040W 3009 nt4.4□□□□□ -1.71
RRP40Q08285 ESF1YDR365C 1887 nt4.39□□□□□ -1.71
RRP40Q08285 YMR196WYMR196W 3267 nt4.39□□□□□ -1.71
RRP40Q08285 TYW3YGL050W 822 nt4.39□□□□□ -1.71
RRP40Q08285 EMP46YLR080W 1335 nt4.39□□□□□ -1.71
RRP40Q08285 PTR2YKR093W 1806 nt4.39□□□□□ -1.71
RRP40Q08285 SSB2YNL209W 1842 nt4.39□□□□□ -1.71
RRP40Q08285 RTC5YOR118W 1704 nt4.38□□□□□ -1.71
RRP40Q08285 HIR2YOR038C 2628 nt4.38□□□□□ -1.71
RRP40Q08285 TFB3YDR460W 966 nt4.38□□□□□ -1.71
RRP40Q08285 NMA1YLR328W 1206 nt4.38□□□□□ -1.71
RRP40Q08285 CTT1YGR088W 1689 nt4.38□□□□□ -1.71
RRP40Q08285 PAN1YIR006C 4443 nt4.38□□□□□ -1.71
RRP40Q08285 MDR1YGR100W 2853 nt4.37□□□□□ -1.71
RRP40Q08285 ALG2YGL065C 1512 nt4.37□□□□□ -1.71
RRP40Q08285 YDL124WYDL124W 939 nt4.37□□□□□ -1.71
RRP40Q08285 YIL171W-AYIL171W-A 453 nt4.37□□□□□ -1.71
RRP40Q08285 YJL220WYJL220W 453 nt4.37□□□□□ -1.71
RRP40Q08285 YNL228WYNL228W 777 nt4.37□□□□□ -1.71
RRP40Q08285 MAK3YPR051W 531 nt4.37□□□□□ -1.71
RRP40Q08285 YPR109WYPR109W 885 nt4.37□□□□□ -1.71
RRP40Q08285 UMP1YBR173C 447 nt4.37□□□□□ -1.71
RRP40Q08285 THI20YOL055C 1656 nt4.37□□□□□ -1.71
RRP40Q08285 GIP1YBR045C 1920 nt4.36□□□□□ -1.71
RRP40Q08285 RRB1YMR131C 1536 nt4.36□□□□□ -1.71
RRP40Q08285 HMLALPHA1YCL066W 528 nt4.36□□□□□ -1.71
RRP40Q08285 MATALPHA1YCR040W 528 nt4.36□□□□□ -1.71
RRP40Q08285 DCD1YHR144C 939 nt4.36□□□□□ -1.71
RRP40Q08285 GAT3YLR013W 426 nt4.36□□□□□ -1.71
RRP40Q08285 MAP2YBL091C 1266 nt4.36□□□□□ -1.71
RRP40Q08285 YPL113CYPL113C 1191 nt4.36□□□□□ -1.71
RRP40Q08285 YPL245WYPL245W 1365 nt4.36□□□□□ -1.71
RRP40Q08285 MAG2YLR427W 2013 nt4.36□□□□□ -1.71
RRP40Q08285 KAP114YGL241W 3015 nt4.35□□□□□ -1.71
RRP40Q08285 YFR034W-AYFR034W-A 288 nt4.35□□□□□ -1.71
Retrieved 100 of 7,029 protein–RNA pairs in 29.7 ms