Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
BCKDHBP21953 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.74■■□□□ 1.23
BCKDHBP21953 MIR6089-201ENST00000616698 64 ntBASIC22.74■■□□□ 1.23
BCKDHBP21953 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC22.74■■□□□ 1.23
BCKDHBP21953 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC22.74■■□□□ 1.23
BCKDHBP21953 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
BCKDHBP21953 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
BCKDHBP21953 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC22.74■■□□□ 1.23
BCKDHBP21953 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC22.73■■□□□ 1.23
BCKDHBP21953 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
BCKDHBP21953 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
BCKDHBP21953 HACD1-201ENST00000326961 773 ntTSL 2 BASIC22.73■■□□□ 1.23
BCKDHBP21953 ASB1-202ENST00000409297 878 ntTSL 5 BASIC22.73■■□□□ 1.23
BCKDHBP21953 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
BCKDHBP21953 AC090192.1-201ENST00000517740 490 ntBASIC22.73■■□□□ 1.23
BCKDHBP21953 NKILA-201ENST00000613231 537 ntTSL 4 BASIC22.73■■□□□ 1.23
BCKDHBP21953 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
BCKDHBP21953 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
BCKDHBP21953 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
BCKDHBP21953 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
BCKDHBP21953 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
BCKDHBP21953 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
BCKDHBP21953 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
BCKDHBP21953 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC22.72■■□□□ 1.23
BCKDHBP21953 AL031602.1-201ENST00000633169 911 ntBASIC22.72■■□□□ 1.23
BCKDHBP21953 RARRES2P11-201ENST00000635158 484 ntBASIC22.72■■□□□ 1.23
BCKDHBP21953 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC22.72■■□□□ 1.23
BCKDHBP21953 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
BCKDHBP21953 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
BCKDHBP21953 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC22.71■■□□□ 1.23
BCKDHBP21953 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
BCKDHBP21953 AK1-201ENST00000223836 736 ntTSL 3 BASIC22.71■■□□□ 1.23
BCKDHBP21953 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC22.71■■□□□ 1.23
BCKDHBP21953 AC034268.1-201ENST00000441047 882 ntBASIC22.71■■□□□ 1.23
BCKDHBP21953 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC22.71■■□□□ 1.23
BCKDHBP21953 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
BCKDHBP21953 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
BCKDHBP21953 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC22.71■■□□□ 1.23
BCKDHBP21953 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
BCKDHBP21953 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
BCKDHBP21953 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.7■■□□□ 1.22
BCKDHBP21953 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
BCKDHBP21953 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC22.7■■□□□ 1.22
BCKDHBP21953 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC22.7■■□□□ 1.22
BCKDHBP21953 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC22.7■■□□□ 1.22
BCKDHBP21953 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
BCKDHBP21953 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC22.7■■□□□ 1.22
BCKDHBP21953 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC22.7■■□□□ 1.22
BCKDHBP21953 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
BCKDHBP21953 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
BCKDHBP21953 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
BCKDHBP21953 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.69■■□□□ 1.22
BCKDHBP21953 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC22.69■■□□□ 1.22
BCKDHBP21953 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
BCKDHBP21953 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
BCKDHBP21953 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
BCKDHBP21953 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC22.69■■□□□ 1.22
BCKDHBP21953 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
BCKDHBP21953 AC022517.1-201ENST00000592429 346 ntBASIC22.69■■□□□ 1.22
BCKDHBP21953 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC22.69■■□□□ 1.22
BCKDHBP21953 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
BCKDHBP21953 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC22.69■■□□□ 1.22
BCKDHBP21953 VGF-203ENST00000611537 1622 ntTSL 5 BASIC22.68■■□□□ 1.22
BCKDHBP21953 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
BCKDHBP21953 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
BCKDHBP21953 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC22.68■■□□□ 1.22
BCKDHBP21953 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
BCKDHBP21953 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
BCKDHBP21953 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC22.68■■□□□ 1.22
BCKDHBP21953 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
BCKDHBP21953 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
BCKDHBP21953 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC22.67■■□□□ 1.22
BCKDHBP21953 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
BCKDHBP21953 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
BCKDHBP21953 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
BCKDHBP21953 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC22.67■■□□□ 1.22
BCKDHBP21953 KRT18P5-201ENST00000436075 1291 ntBASIC22.67■■□□□ 1.22
BCKDHBP21953 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC22.67■■□□□ 1.22
BCKDHBP21953 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
BCKDHBP21953 AC126544.1-201ENST00000580842 1059 ntBASIC22.67■■□□□ 1.22
BCKDHBP21953 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
BCKDHBP21953 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
BCKDHBP21953 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
BCKDHBP21953 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC22.66■■□□□ 1.22
BCKDHBP21953 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC22.66■■□□□ 1.22
BCKDHBP21953 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
BCKDHBP21953 pRNA.6-201ENST00000610482 90 ntBASIC22.66■■□□□ 1.22
BCKDHBP21953 pRNA.5-201ENST00000612139 90 ntBASIC22.66■■□□□ 1.22
BCKDHBP21953 pRNA.11-201ENST00000618423 90 ntBASIC22.66■■□□□ 1.22
BCKDHBP21953 pRNA.13-201ENST00000619112 90 ntBASIC22.66■■□□□ 1.22
BCKDHBP21953 LSR-205ENST00000427250 1606 ntTSL 2 BASIC22.66■■□□□ 1.22
BCKDHBP21953 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
BCKDHBP21953 YBX1P1-201ENST00000445822 960 ntBASIC22.65■■□□□ 1.22
BCKDHBP21953 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC22.65■■□□□ 1.22
BCKDHBP21953 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC22.65■■□□□ 1.22
BCKDHBP21953 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
BCKDHBP21953 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
BCKDHBP21953 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
BCKDHBP21953 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
BCKDHBP21953 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms