Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CD3DP04234 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.31■□□□□ 0.68
CD3DP04234 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CD3DP04234 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CD3DP04234 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.31■□□□□ 0.68
CD3DP04234 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CD3DP04234 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CD3DP04234 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CD3DP04234 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.31■□□□□ 0.68
CD3DP04234 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CD3DP04234 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CD3DP04234 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.3■□□□□ 0.68
CD3DP04234 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.3■□□□□ 0.68
CD3DP04234 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CD3DP04234 CR559946.2-201ENST00000623684 991 ntBASIC19.3■□□□□ 0.68
CD3DP04234 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CD3DP04234 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
CD3DP04234 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CD3DP04234 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CD3DP04234 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CD3DP04234 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.29■□□□□ 0.68
CD3DP04234 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CD3DP04234 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CD3DP04234 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CD3DP04234 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CD3DP04234 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CD3DP04234 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CD3DP04234 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CD3DP04234 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CD3DP04234 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CD3DP04234 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.29■□□□□ 0.68
CD3DP04234 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CD3DP04234 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CD3DP04234 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CD3DP04234 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CD3DP04234 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CD3DP04234 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CD3DP04234 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CD3DP04234 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CD3DP04234 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CD3DP04234 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CD3DP04234 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CD3DP04234 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CD3DP04234 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.28■□□□□ 0.68
CD3DP04234 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CD3DP04234 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CD3DP04234 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.27■□□□□ 0.68
CD3DP04234 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CD3DP04234 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.27■□□□□ 0.68
CD3DP04234 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.27■□□□□ 0.68
CD3DP04234 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CD3DP04234 AL024507.2-201ENST00000606070 2574 ntBASIC19.27■□□□□ 0.68
CD3DP04234 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CD3DP04234 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CD3DP04234 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CD3DP04234 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CD3DP04234 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
CD3DP04234 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CD3DP04234 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CD3DP04234 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
CD3DP04234 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CD3DP04234 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CD3DP04234 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CD3DP04234 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CD3DP04234 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CD3DP04234 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CD3DP04234 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CD3DP04234 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CD3DP04234 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CD3DP04234 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.25■□□□□ 0.67
CD3DP04234 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CD3DP04234 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CD3DP04234 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.25■□□□□ 0.67
CD3DP04234 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.25■□□□□ 0.67
CD3DP04234 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CD3DP04234 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CD3DP04234 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC19.25■□□□□ 0.67
CD3DP04234 ZNRF2P2-203ENST00000454624 420 ntBASIC19.25■□□□□ 0.67
CD3DP04234 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CD3DP04234 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.25■□□□□ 0.67
CD3DP04234 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CD3DP04234 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.25■□□□□ 0.67
CD3DP04234 PKD1P6-201ENST00000343738 4769 ntBASIC19.24■□□□□ 0.67
CD3DP04234 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.24■□□□□ 0.67
CD3DP04234 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.24■□□□□ 0.67
CD3DP04234 AC060814.1-201ENST00000554326 538 ntBASIC19.24■□□□□ 0.67
CD3DP04234 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
CD3DP04234 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.24■□□□□ 0.67
CD3DP04234 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CD3DP04234 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CD3DP04234 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.24■□□□□ 0.67
CD3DP04234 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CD3DP04234 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CD3DP04234 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CD3DP04234 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CD3DP04234 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CD3DP04234 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CD3DP04234 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.23■□□□□ 0.67
CD3DP04234 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CD3DP04234 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms