Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC10.38□□□□□ -0.75
USH2AO75445 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
USH2AO75445 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC10.38□□□□□ -0.75
USH2AO75445 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC10.38□□□□□ -0.75
USH2AO75445 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
USH2AO75445 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
USH2AO75445 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC10.38□□□□□ -0.75
USH2AO75445 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
USH2AO75445 HSCB-202ENST00000398941 955 ntTSL 2 BASIC10.38□□□□□ -0.75
USH2AO75445 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
USH2AO75445 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
USH2AO75445 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
USH2AO75445 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
USH2AO75445 TBCB-214ENST00000629269 413 ntTSL 5 BASIC10.37□□□□□ -0.75
USH2AO75445 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC10.37□□□□□ -0.75
USH2AO75445 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC10.37□□□□□ -0.75
USH2AO75445 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
USH2AO75445 HES6-206ENST00000409574 738 ntTSL 2 BASIC10.37□□□□□ -0.75
USH2AO75445 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC10.37□□□□□ -0.75
USH2AO75445 AC090877.2-201ENST00000558441 1738 ntBASIC10.37□□□□□ -0.75
USH2AO75445 AL050303.2-201ENST00000619798 666 ntBASIC10.37□□□□□ -0.75
USH2AO75445 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC10.37□□□□□ -0.75
USH2AO75445 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
USH2AO75445 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC10.37□□□□□ -0.75
USH2AO75445 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
USH2AO75445 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC10.37□□□□□ -0.75
USH2AO75445 AL596275.1-201ENST00000423464 877 ntBASIC10.37□□□□□ -0.75
USH2AO75445 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
USH2AO75445 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC10.37□□□□□ -0.75
USH2AO75445 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
USH2AO75445 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC10.37□□□□□ -0.75
USH2AO75445 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC10.37□□□□□ -0.75
USH2AO75445 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
USH2AO75445 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
USH2AO75445 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
USH2AO75445 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
USH2AO75445 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
USH2AO75445 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
USH2AO75445 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC10.36□□□□□ -0.75
USH2AO75445 TPRG1LP1-201ENST00000598702 760 ntBASIC10.36□□□□□ -0.75
USH2AO75445 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
USH2AO75445 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
USH2AO75445 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
USH2AO75445 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC10.36□□□□□ -0.75
USH2AO75445 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
USH2AO75445 SLC7A5P2-201ENST00000553010 536 ntBASIC10.36□□□□□ -0.75
USH2AO75445 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
USH2AO75445 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
USH2AO75445 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
USH2AO75445 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
USH2AO75445 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
USH2AO75445 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
USH2AO75445 GALNS-213ENST00000569433 723 ntTSL 3 BASIC10.36□□□□□ -0.75
USH2AO75445 AP004607.4-201ENST00000530158 1459 ntBASIC10.35□□□□□ -0.75
USH2AO75445 AC069152.1-201ENST00000438030 544 ntBASIC10.35□□□□□ -0.75
USH2AO75445 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
USH2AO75445 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
USH2AO75445 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC10.35□□□□□ -0.75
USH2AO75445 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC10.35□□□□□ -0.75
USH2AO75445 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC10.35□□□□□ -0.75
USH2AO75445 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
USH2AO75445 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
USH2AO75445 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
USH2AO75445 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
USH2AO75445 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
USH2AO75445 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC10.35□□□□□ -0.75
USH2AO75445 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
USH2AO75445 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
USH2AO75445 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
USH2AO75445 MIR663A-201ENST00000385250 93 ntBASIC10.35□□□□□ -0.75
USH2AO75445 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC10.35□□□□□ -0.75
USH2AO75445 AC126544.1-201ENST00000580842 1059 ntBASIC10.35□□□□□ -0.75
USH2AO75445 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
USH2AO75445 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
USH2AO75445 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
USH2AO75445 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
USH2AO75445 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC10.34□□□□□ -0.75
USH2AO75445 AC137761.2-201ENST00000561729 223 ntBASIC10.34□□□□□ -0.75
USH2AO75445 AC145350.3-201ENST00000569033 163 ntBASIC10.34□□□□□ -0.75
USH2AO75445 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC10.34□□□□□ -0.75
USH2AO75445 GTSE1-AS1-202ENST00000623117 1518 ntBASIC10.34□□□□□ -0.75
USH2AO75445 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
USH2AO75445 AC098590.1-201ENST00000468126 897 ntBASIC10.34□□□□□ -0.75
USH2AO75445 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
USH2AO75445 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC10.34□□□□□ -0.75
USH2AO75445 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
USH2AO75445 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
USH2AO75445 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
USH2AO75445 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
USH2AO75445 CASP6-205ENST00000505486 538 ntTSL 4 BASIC10.34□□□□□ -0.75
USH2AO75445 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
USH2AO75445 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC10.33□□□□□ -0.76
USH2AO75445 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC10.33□□□□□ -0.76
USH2AO75445 PRORSD1P-201ENST00000295112 541 ntBASIC10.33□□□□□ -0.76
USH2AO75445 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
USH2AO75445 DBI-210ENST00000542275 757 ntTSL 5 BASIC10.33□□□□□ -0.76
USH2AO75445 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC10.33□□□□□ -0.76
USH2AO75445 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC10.33□□□□□ -0.76
USH2AO75445 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
USH2AO75445 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms