Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAV13-2A0A0B4J235 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV13-2A0A0B4J235 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
TRAV13-2A0A0B4J235 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV13-2A0A0B4J235 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAV13-2A0A0B4J235 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
TRAV13-2A0A0B4J235 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV13-2A0A0B4J235 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV13-2A0A0B4J235 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAV13-2A0A0B4J235 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV13-2A0A0B4J235 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
TRAV13-2A0A0B4J235 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV13-2A0A0B4J235 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV13-2A0A0B4J235 AL359258.2-201ENST00000564063 1566 ntBASIC15.03■□□□□ -0
TRAV13-2A0A0B4J235 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV13-2A0A0B4J235 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV13-2A0A0B4J235 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TRAV13-2A0A0B4J235 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV13-2A0A0B4J235 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV13-2A0A0B4J235 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV13-2A0A0B4J235 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV13-2A0A0B4J235 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
TRAV13-2A0A0B4J235 AC092068.2-201ENST00000590491 1708 ntBASIC15.03■□□□□ -0
TRAV13-2A0A0B4J235 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
TRAV13-2A0A0B4J235 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV13-2A0A0B4J235 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV13-2A0A0B4J235 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV13-2A0A0B4J235 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
TRAV13-2A0A0B4J235 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV13-2A0A0B4J235 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV13-2A0A0B4J235 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRAV13-2A0A0B4J235 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC15.02■□□□□ -0
TRAV13-2A0A0B4J235 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC15.02■□□□□ -0
TRAV13-2A0A0B4J235 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC15.02□□□□□ -0.01
TRAV13-2A0A0B4J235 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
TRAV13-2A0A0B4J235 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV13-2A0A0B4J235 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV13-2A0A0B4J235 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
TRAV13-2A0A0B4J235 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV13-2A0A0B4J235 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV13-2A0A0B4J235 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV13-2A0A0B4J235 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV13-2A0A0B4J235 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TRAV13-2A0A0B4J235 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC15.01□□□□□ -0.01
TRAV13-2A0A0B4J235 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV13-2A0A0B4J235 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
TRAV13-2A0A0B4J235 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV13-2A0A0B4J235 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
TRAV13-2A0A0B4J235 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV13-2A0A0B4J235 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV13-2A0A0B4J235 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV13-2A0A0B4J235 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV13-2A0A0B4J235 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
TRAV13-2A0A0B4J235 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV13-2A0A0B4J235 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV13-2A0A0B4J235 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV13-2A0A0B4J235 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC15.01□□□□□ -0.01
TRAV13-2A0A0B4J235 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC15.01□□□□□ -0.01
TRAV13-2A0A0B4J235 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
TRAV13-2A0A0B4J235 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAV13-2A0A0B4J235 AC007375.3-201ENST00000600936 2314 ntBASIC15□□□□□ -0.01
TRAV13-2A0A0B4J235 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAV13-2A0A0B4J235 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV13-2A0A0B4J235 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV13-2A0A0B4J235 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAV13-2A0A0B4J235 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC15□□□□□ -0.01
TRAV13-2A0A0B4J235 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
TRAV13-2A0A0B4J235 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC15□□□□□ -0.01
TRAV13-2A0A0B4J235 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAV13-2A0A0B4J235 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
TRAV13-2A0A0B4J235 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
TRAV13-2A0A0B4J235 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
TRAV13-2A0A0B4J235 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV13-2A0A0B4J235 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV13-2A0A0B4J235 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAV13-2A0A0B4J235 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV13-2A0A0B4J235 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC14.99□□□□□ -0.01
TRAV13-2A0A0B4J235 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV13-2A0A0B4J235 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
TRAV13-2A0A0B4J235 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC14.99□□□□□ -0.01
TRAV13-2A0A0B4J235 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV13-2A0A0B4J235 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC14.99□□□□□ -0.01
TRAV13-2A0A0B4J235 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV13-2A0A0B4J235 SUZ12P1-203ENST00000578195 985 ntBASIC14.99□□□□□ -0.01
TRAV13-2A0A0B4J235 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV13-2A0A0B4J235 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV13-2A0A0B4J235 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV13-2A0A0B4J235 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
TRAV13-2A0A0B4J235 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV13-2A0A0B4J235 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV13-2A0A0B4J235 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
TRAV13-2A0A0B4J235 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV13-2A0A0B4J235 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TRAV13-2A0A0B4J235 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV13-2A0A0B4J235 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV13-2A0A0B4J235 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV13-2A0A0B4J235 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV13-2A0A0B4J235 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC14.98□□□□□ -0.01
TRAV13-2A0A0B4J235 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV13-2A0A0B4J235 MED17-221ENST00000639724 2317 ntTSL 5 BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms