Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC25.62■■□□□ 1.69
COL4A3BPQ9Y5P4 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
COL4A3BPQ9Y5P4 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
COL4A3BPQ9Y5P4 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
COL4A3BPQ9Y5P4 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
COL4A3BPQ9Y5P4 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC25.61■■□□□ 1.69
COL4A3BPQ9Y5P4 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC25.61■■□□□ 1.69
COL4A3BPQ9Y5P4 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
COL4A3BPQ9Y5P4 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
COL4A3BPQ9Y5P4 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
COL4A3BPQ9Y5P4 EXOG-217ENST00000630638 197 ntTSL 5 BASIC25.61■■□□□ 1.69
COL4A3BPQ9Y5P4 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
COL4A3BPQ9Y5P4 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC25.61■■□□□ 1.69
COL4A3BPQ9Y5P4 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
COL4A3BPQ9Y5P4 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
COL4A3BPQ9Y5P4 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
COL4A3BPQ9Y5P4 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
COL4A3BPQ9Y5P4 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC25.6■■□□□ 1.69
COL4A3BPQ9Y5P4 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC25.6■■□□□ 1.69
COL4A3BPQ9Y5P4 MIR6724-1-201ENST00000616420 92 ntBASIC25.6■■□□□ 1.69
COL4A3BPQ9Y5P4 MIR6724-2-201ENST00000616483 92 ntBASIC25.6■■□□□ 1.69
COL4A3BPQ9Y5P4 MIR6724-4-201ENST00000617390 92 ntBASIC25.6■■□□□ 1.69
COL4A3BPQ9Y5P4 MIR6724-3-201ENST00000622482 92 ntBASIC25.6■■□□□ 1.69
COL4A3BPQ9Y5P4 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC25.6■■□□□ 1.69
COL4A3BPQ9Y5P4 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
COL4A3BPQ9Y5P4 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
COL4A3BPQ9Y5P4 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC25.6■■□□□ 1.69
COL4A3BPQ9Y5P4 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC25.59■■□□□ 1.69
COL4A3BPQ9Y5P4 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC25.59■■□□□ 1.69
COL4A3BPQ9Y5P4 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC25.59■■□□□ 1.69
COL4A3BPQ9Y5P4 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
COL4A3BPQ9Y5P4 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
COL4A3BPQ9Y5P4 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
COL4A3BPQ9Y5P4 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
COL4A3BPQ9Y5P4 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
COL4A3BPQ9Y5P4 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.68
COL4A3BPQ9Y5P4 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.68
COL4A3BPQ9Y5P4 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
COL4A3BPQ9Y5P4 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
COL4A3BPQ9Y5P4 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
COL4A3BPQ9Y5P4 AL161729.1-201ENST00000604104 1402 ntBASIC25.57■■□□□ 1.68
COL4A3BPQ9Y5P4 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
COL4A3BPQ9Y5P4 LSM7-203ENST00000585409 512 ntTSL 2 BASIC25.57■■□□□ 1.68
COL4A3BPQ9Y5P4 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC25.56■■□□□ 1.68
COL4A3BPQ9Y5P4 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC25.56■■□□□ 1.68
COL4A3BPQ9Y5P4 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC25.56■■□□□ 1.68
COL4A3BPQ9Y5P4 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
COL4A3BPQ9Y5P4 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC25.56■■□□□ 1.68
COL4A3BPQ9Y5P4 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
COL4A3BPQ9Y5P4 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
COL4A3BPQ9Y5P4 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC25.56■■□□□ 1.68
COL4A3BPQ9Y5P4 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
COL4A3BPQ9Y5P4 AL022069.1-201ENST00000568025 1636 ntBASIC25.55■■□□□ 1.68
COL4A3BPQ9Y5P4 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
COL4A3BPQ9Y5P4 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
COL4A3BPQ9Y5P4 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC25.55■■□□□ 1.68
COL4A3BPQ9Y5P4 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC25.55■■□□□ 1.68
COL4A3BPQ9Y5P4 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
COL4A3BPQ9Y5P4 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
COL4A3BPQ9Y5P4 CD72-202ENST00000378430 585 ntTSL 3 BASIC25.55■■□□□ 1.68
COL4A3BPQ9Y5P4 AL117332.1-201ENST00000622628 974 ntBASIC25.55■■□□□ 1.68
COL4A3BPQ9Y5P4 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC25.55■■□□□ 1.68
COL4A3BPQ9Y5P4 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
COL4A3BPQ9Y5P4 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
COL4A3BPQ9Y5P4 CD37-213ENST00000598095 1598 ntTSL 2 BASIC25.55■■□□□ 1.68
COL4A3BPQ9Y5P4 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
COL4A3BPQ9Y5P4 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
COL4A3BPQ9Y5P4 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC25.54■■□□□ 1.68
COL4A3BPQ9Y5P4 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC25.54■■□□□ 1.68
COL4A3BPQ9Y5P4 MIR6722-201ENST00000617286 78 ntBASIC25.54■■□□□ 1.68
COL4A3BPQ9Y5P4 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
COL4A3BPQ9Y5P4 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
COL4A3BPQ9Y5P4 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
COL4A3BPQ9Y5P4 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
COL4A3BPQ9Y5P4 AC004448.1-201ENST00000458332 883 ntBASIC25.53■■□□□ 1.68
COL4A3BPQ9Y5P4 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
COL4A3BPQ9Y5P4 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
COL4A3BPQ9Y5P4 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
COL4A3BPQ9Y5P4 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
COL4A3BPQ9Y5P4 AC131274.2-201ENST00000580697 1507 ntBASIC25.53■■□□□ 1.68
COL4A3BPQ9Y5P4 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC25.52■■□□□ 1.68
COL4A3BPQ9Y5P4 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
COL4A3BPQ9Y5P4 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
COL4A3BPQ9Y5P4 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC25.52■■□□□ 1.68
COL4A3BPQ9Y5P4 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
COL4A3BPQ9Y5P4 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
COL4A3BPQ9Y5P4 STK32C-205ENST00000456004 607 ntTSL 2 BASIC25.52■■□□□ 1.68
COL4A3BPQ9Y5P4 CLTA-206ENST00000466396 695 ntTSL 2 BASIC25.52■■□□□ 1.68
COL4A3BPQ9Y5P4 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC25.52■■□□□ 1.68
COL4A3BPQ9Y5P4 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
COL4A3BPQ9Y5P4 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
COL4A3BPQ9Y5P4 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
COL4A3BPQ9Y5P4 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
COL4A3BPQ9Y5P4 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
COL4A3BPQ9Y5P4 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC25.51■■□□□ 1.67
COL4A3BPQ9Y5P4 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC25.51■■□□□ 1.67
COL4A3BPQ9Y5P4 MIR3621-201ENST00000580529 85 ntBASIC25.51■■□□□ 1.67
COL4A3BPQ9Y5P4 TRIR-202ENST00000588213 841 ntTSL 3 BASIC25.51■■□□□ 1.67
COL4A3BPQ9Y5P4 AC008406.3-201ENST00000620001 1374 ntBASIC25.51■■□□□ 1.67
COL4A3BPQ9Y5P4 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms