Protein–RNA interactions for Protein: Q9NQG5

RPRD1B, Regulation of nuclear pre-mRNA domain-containing protein 1B, humanhuman

Known RBP Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1BQ9NQG5 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.74■□□□□ 0.91
RPRD1BQ9NQG5 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
RPRD1BQ9NQG5 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPRD1BQ9NQG5 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPRD1BQ9NQG5 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RPRD1BQ9NQG5 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RPRD1BQ9NQG5 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
RPRD1BQ9NQG5 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPRD1BQ9NQG5 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.72■□□□□ 0.91
RPRD1BQ9NQG5 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RPRD1BQ9NQG5 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPRD1BQ9NQG5 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.72■□□□□ 0.91
RPRD1BQ9NQG5 RARRES2P2-201ENST00000394842 485 ntBASIC20.72■□□□□ 0.91
RPRD1BQ9NQG5 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.72■□□□□ 0.91
RPRD1BQ9NQG5 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
RPRD1BQ9NQG5 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPRD1BQ9NQG5 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RPRD1BQ9NQG5 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
RPRD1BQ9NQG5 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
RPRD1BQ9NQG5 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
RPRD1BQ9NQG5 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPRD1BQ9NQG5 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
RPRD1BQ9NQG5 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RPRD1BQ9NQG5 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RPRD1BQ9NQG5 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
RPRD1BQ9NQG5 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPRD1BQ9NQG5 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.71■□□□□ 0.91
RPRD1BQ9NQG5 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.71■□□□□ 0.91
RPRD1BQ9NQG5 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
RPRD1BQ9NQG5 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPRD1BQ9NQG5 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPRD1BQ9NQG5 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RPRD1BQ9NQG5 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPRD1BQ9NQG5 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RPRD1BQ9NQG5 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.7■□□□□ 0.9
RPRD1BQ9NQG5 DUX4L9-201ENST00000449051 1259 ntBASIC20.7■□□□□ 0.9
RPRD1BQ9NQG5 MIR6765-201ENST00000614092 87 ntBASIC20.7■□□□□ 0.9
RPRD1BQ9NQG5 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.7■□□□□ 0.9
RPRD1BQ9NQG5 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPRD1BQ9NQG5 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RPRD1BQ9NQG5 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPRD1BQ9NQG5 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPRD1BQ9NQG5 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.7■□□□□ 0.9
RPRD1BQ9NQG5 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
RPRD1BQ9NQG5 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPRD1BQ9NQG5 PKD1P6-201ENST00000343738 4769 ntBASIC20.69■□□□□ 0.9
RPRD1BQ9NQG5 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPRD1BQ9NQG5 AC087393.1-201ENST00000582896 145 ntBASIC20.69■□□□□ 0.9
RPRD1BQ9NQG5 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RPRD1BQ9NQG5 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPRD1BQ9NQG5 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPRD1BQ9NQG5 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPRD1BQ9NQG5 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
RPRD1BQ9NQG5 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.69■□□□□ 0.9
RPRD1BQ9NQG5 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RPRD1BQ9NQG5 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.68■□□□□ 0.9
RPRD1BQ9NQG5 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.68■□□□□ 0.9
RPRD1BQ9NQG5 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.68■□□□□ 0.9
RPRD1BQ9NQG5 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.68■□□□□ 0.9
RPRD1BQ9NQG5 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
RPRD1BQ9NQG5 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPRD1BQ9NQG5 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.68■□□□□ 0.9
RPRD1BQ9NQG5 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPRD1BQ9NQG5 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RPRD1BQ9NQG5 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.67■□□□□ 0.9
RPRD1BQ9NQG5 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.67■□□□□ 0.9
RPRD1BQ9NQG5 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPRD1BQ9NQG5 HSD17B1P1-201ENST00000590052 955 ntBASIC20.67■□□□□ 0.9
RPRD1BQ9NQG5 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.67■□□□□ 0.9
RPRD1BQ9NQG5 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPRD1BQ9NQG5 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPRD1BQ9NQG5 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPRD1BQ9NQG5 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.66■□□□□ 0.9
RPRD1BQ9NQG5 U85056.1-201ENST00000616429 682 ntBASIC20.66■□□□□ 0.9
RPRD1BQ9NQG5 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
RPRD1BQ9NQG5 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RPRD1BQ9NQG5 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.66■□□□□ 0.9
RPRD1BQ9NQG5 AC090877.2-201ENST00000558441 1738 ntBASIC20.66■□□□□ 0.9
RPRD1BQ9NQG5 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RPRD1BQ9NQG5 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPRD1BQ9NQG5 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPRD1BQ9NQG5 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.66■□□□□ 0.9
RPRD1BQ9NQG5 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RPRD1BQ9NQG5 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RPRD1BQ9NQG5 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPRD1BQ9NQG5 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPRD1BQ9NQG5 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.65■□□□□ 0.9
RPRD1BQ9NQG5 DUSP8P5-201ENST00000422884 1815 ntBASIC20.65■□□□□ 0.9
RPRD1BQ9NQG5 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPRD1BQ9NQG5 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
RPRD1BQ9NQG5 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.65■□□□□ 0.9
RPRD1BQ9NQG5 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.65■□□□□ 0.9
RPRD1BQ9NQG5 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
RPRD1BQ9NQG5 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.65■□□□□ 0.9
RPRD1BQ9NQG5 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPRD1BQ9NQG5 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.64■□□□□ 0.9
RPRD1BQ9NQG5 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RPRD1BQ9NQG5 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
RPRD1BQ9NQG5 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
RPRD1BQ9NQG5 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms