Protein–RNA interactions for Protein: Q96I24

FUBP3, Far upstream element-binding protein 3, humanhuman

Known RBP eCLIP

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FUBP3Q96I24 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.352e-10■■■□□ 16.1
FUBP3Q96I24 CCAR1-212ENST00000540210 3415 ntTSL 1 (best)4.2□□□□□ -1.742e-10■■■□□ 16.1
FUBP3Q96I24 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.09□□□□□ -2.072e-7■■■□□ 16.1
FUBP3Q96I24 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.66■□□□□ 0.422e-7■■■□□ 16.1
FUBP3Q96I24 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.152e-7■■■□□ 16.1
FUBP3Q96I24 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.761e-6■■■□□ 16.1
FUBP3Q96I24 SGK1-211ENST00000475719 1383 ntTSL 2 BASIC10.12□□□□□ -0.791e-8■■■□□ 16.1
FUBP3Q96I24 MDM4-209ENST00000463049 6102 ntTSL 59.99□□□□□ -0.811e-8■■■□□ 16.1
FUBP3Q96I24 HNMT-206ENST00000475675 743 ntTSL 38.77□□□□□ -1.011e-8■■■□□ 16.1
FUBP3Q96I24 SGK1-223ENST00000528577 1850 ntTSL 1 (best) BASIC7.79□□□□□ -1.161e-8■■■□□ 16.1
FUBP3Q96I24 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC7.55□□□□□ -1.21e-8■■■□□ 16.1
FUBP3Q96I24 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC7.42□□□□□ -1.221e-8■■■□□ 16.1
FUBP3Q96I24 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC7.15□□□□□ -1.261e-8■■■□□ 16.1
FUBP3Q96I24 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC7.11□□□□□ -1.271e-8■■■□□ 16.1
FUBP3Q96I24 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC6.87□□□□□ -1.311e-8■■■□□ 16.1
FUBP3Q96I24 HNMT-207ENST00000480534 339 ntTSL 36.71□□□□□ -1.341e-8■■■□□ 16.1
FUBP3Q96I24 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC6.68□□□□□ -1.341e-8■■■□□ 16.1
FUBP3Q96I24 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.67□□□□□ -1.341e-8■■■□□ 16.1
FUBP3Q96I24 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.58□□□□□ -1.361e-8■■■□□ 16.1
FUBP3Q96I24 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.391e-8■■■□□ 16.1
FUBP3Q96I24 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.296e-8■■■□□ 16
FUBP3Q96I24 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC14.37□□□□□ -0.116e-8■■■□□ 16
FUBP3Q96I24 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.492e-6■■■□□ 16
FUBP3Q96I24 PSMC6-217ENST00000557632 611 ntTSL 27.15□□□□□ -1.262e-6■■■□□ 16
FUBP3Q96I24 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.272e-6■■■□□ 16
FUBP3Q96I24 PSMC6-216ENST00000557557 2939 ntTSL 26.49□□□□□ -1.372e-6■■■□□ 16
FUBP3Q96I24 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.422e-6■■■□□ 16
FUBP3Q96I24 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.432e-6■■■□□ 16
FUBP3Q96I24 PSMC6-209ENST00000555175 752 ntTSL 35.91□□□□□ -1.462e-6■■■□□ 16
FUBP3Q96I24 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.172e-6■■■□□ 16
FUBP3Q96I24 C1GALT1-205ENST00000436587 6235 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.352e-7■■■□□ 16
FUBP3Q96I24 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.011e-7■■■□□ 15.9
FUBP3Q96I24 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC14.44□□□□□ -0.11e-7■■■□□ 15.9
FUBP3Q96I24 REEP5-204ENST00000497856 1779 ntTSL 1 (best)13.94□□□□□ -0.181e-7■■■□□ 15.9
FUBP3Q96I24 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC7.02□□□□□ -1.292e-12■■■□□ 15.9
FUBP3Q96I24 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.84□□□□□ -1.952e-12■■■□□ 15.9
FUBP3Q96I24 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.67□□□□□ -2.142e-12■■■□□ 15.9
FUBP3Q96I24 INSIG2-206ENST00000485520 3185 ntTSL 511.44□□□□□ -0.581e-7■■■□□ 15.9
FUBP3Q96I24 INSIG2-204ENST00000471186 2100 ntTSL 58.75□□□□□ -1.011e-7■■■□□ 15.9
FUBP3Q96I24 INSIG2-201ENST00000245787 2590 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.011e-7■■■□□ 15.9
FUBP3Q96I24 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.141e-6■■■□□ 15.9
FUBP3Q96I24 NEAT1-202ENST00000501122 22743 ntBASIC4.29□□□□□ -1.722e-20■■■□□ 15.9
FUBP3Q96I24 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.183e-6■■■□□ 15.9
FUBP3Q96I24 FBXO34-206ENST00000557647 434 ntTSL 38.57□□□□□ -1.043e-6■■■□□ 15.9
FUBP3Q96I24 FBXO34-205ENST00000555280 2512 ntTSL 37.53□□□□□ -1.23e-6■■■□□ 15.9
FUBP3Q96I24 DLC1-201ENST00000276297 7447 ntAPPRIS P4 TSL 1 (best) BASIC8.46□□□□□ -1.062e-6■■■□□ 15.9
FUBP3Q96I24 NFAT5-204ENST00000426654 14219 ntTSL 1 (best)7.6□□□□□ -1.192e-7■■■□□ 15.9
FUBP3Q96I24 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC7.32□□□□□ -1.242e-7■■■□□ 15.9
FUBP3Q96I24 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.7□□□□□ -1.342e-7■■■□□ 15.9
FUBP3Q96I24 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.712e-7■■■□□ 15.9
FUBP3Q96I24 EPB41L2-204ENST00000392427 3369 ntTSL 1 (best) BASIC13.43□□□□□ -0.267e-8■■■□□ 15.8
FUBP3Q96I24 EPB41L2-205ENST00000445890 3677 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.277e-8■■■□□ 15.8
FUBP3Q96I24 EPB41L2-203ENST00000368128 4456 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.487e-8■■■□□ 15.8
FUBP3Q96I24 EPB41L2-224ENST00000530481 3914 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.597e-8■■■□□ 15.8
FUBP3Q96I24 EPB41L2-232ENST00000628542 4247 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.77e-8■■■□□ 15.8
FUBP3Q96I24 EPB41L2-201ENST00000337057 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.737e-8■■■□□ 15.8
FUBP3Q96I24 EPB41L2-216ENST00000527411 4186 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.787e-8■■■□□ 15.8
FUBP3Q96I24 EPB41L2-228ENST00000531410 2926 ntTSL 5 BASIC8.09□□□□□ -1.117e-8■■■□□ 15.8
FUBP3Q96I24 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.417e-8■■■□□ 15.8
FUBP3Q96I24 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.64□□□□□ -1.517e-8■■■□□ 15.8
FUBP3Q96I24 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.25■□□□□ 0.517e-24■■■□□ 15.8
FUBP3Q96I24 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.117e-24■■■□□ 15.8
FUBP3Q96I24 HSP90B1-203ENST00000548462 3032 ntTSL 211.53□□□□□ -0.567e-24■■■□□ 15.8
FUBP3Q96I24 HSP90B1-207ENST00000550595 694 ntTSL 26.71□□□□□ -1.347e-24■■■□□ 15.8
FUBP3Q96I24 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.341e-7■■■□□ 15.8
FUBP3Q96I24 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.84□□□□□ -1.481e-7■■■□□ 15.8
FUBP3Q96I24 RBMS1-209ENST00000474820 4016 ntTSL 1 (best)4.93□□□□□ -1.621e-7■■■□□ 15.8
FUBP3Q96I24 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.96■□□□□ 0.473e-7■■■□□ 15.8
FUBP3Q96I24 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.023e-7■■■□□ 15.8
FUBP3Q96I24 PDHX-204ENST00000477173 545 ntTSL 34.57□□□□□ -1.683e-7■■■□□ 15.8
FUBP3Q96I24 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.692e-7■■■□□ 15.8
FUBP3Q96I24 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.512e-7■■■□□ 15.8
FUBP3Q96I24 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.75■□□□□ 0.911e-8■■■□□ 15.8
FUBP3Q96I24 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.03■□□□□ 0.641e-8■■■□□ 15.8
FUBP3Q96I24 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.97■□□□□ 0.151e-8■■■□□ 15.8
FUBP3Q96I24 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC15.4■□□□□ 0.061e-8■■■□□ 15.8
FUBP3Q96I24 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15□□□□□ -0.011e-8■■■□□ 15.8
FUBP3Q96I24 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.181e-8■■■□□ 15.8
FUBP3Q96I24 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC12.51□□□□□ -0.411e-8■■■□□ 15.8
FUBP3Q96I24 PLEKHB2-208ENST00000439822 4177 ntTSL 3 BASIC11.95□□□□□ -0.51e-8■■■□□ 15.8
FUBP3Q96I24 PLEKHB2-201ENST00000234115 4208 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.821e-8■■■□□ 15.8
FUBP3Q96I24 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.183e-13■■■□□ 15.7
FUBP3Q96I24 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.093e-13■■■□□ 15.7
FUBP3Q96I24 SON-208ENST00000455528 8394 ntTSL 1 (best)11.56□□□□□ -0.562e-6■■■□□ 15.7
FUBP3Q96I24 SON-202ENST00000356577 8813 ntTSL 1 (best) BASIC10.57□□□□□ -0.722e-6■■■□□ 15.7
FUBP3Q96I24 SON-207ENST00000436227 5269 ntAPPRIS P1 TSL 58.44□□□□□ -1.062e-6■■■□□ 15.7
FUBP3Q96I24 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.63□□□□□ -1.512e-6■■■□□ 15.7
FUBP3Q96I24 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.022e-6■■■□□ 15.7
FUBP3Q96I24 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.054e-9■■■□□ 15.7
FUBP3Q96I24 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.014e-9■■■□□ 15.7
FUBP3Q96I24 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC23.74■■□□□ 1.399e-7■■■□□ 15.7
FUBP3Q96I24 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.349e-7■■■□□ 15.7
FUBP3Q96I24 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.248e-11■■■□□ 15.7
FUBP3Q96I24 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.168e-11■■■□□ 15.7
FUBP3Q96I24 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.318e-11■■■□□ 15.7
FUBP3Q96I24 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.232e-7■■■□□ 15.7
FUBP3Q96I24 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.79□□□□□ -0.041e-6■■■□□ 15.7
FUBP3Q96I24 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.627e-6■■■□□ 15.7
FUBP3Q96I24 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.347e-6■■■□□ 15.7
FUBP3Q96I24 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.327e-6■■■□□ 15.7
Retrieved 100 of 4,568 protein–RNA pairs in 137.6 ms