RNA–Protein interactions for RNA: ENST00000614459.4

MDM4-215, Transcript of MDM4, p53 regulator, human

TSL 5 BASIC

Gene MDM4, Length 9,782 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MDM4-215	ENST00000614459	MYT1	Q01538	1121 aa		12.51	□□□□□ -0.41
MDM4-215	ENST00000614459	PELP1	Q8IZL8	1130 aa	Known RBP	12.25	□□□□□ -0.45
MDM4-215	ENST00000614459	DCAF8L2	P0C7V8	631 aa		11.84	□□□□□ -0.51
MDM4-215	ENST00000614459	TTBK1	Q5TCY1	1321 aa	Predicted RBP	11.57	□□□□□ -0.56
MDM4-215	ENST00000614459	CCER1	Q8TC90	406 aa	Predicted RBP	11.53	□□□□□ -0.56
MDM4-215	ENST00000614459	YTHDC1	Q96MU7	727 aa	Known RBP	11.47	□□□□□ -0.57
MDM4-215	ENST00000614459	CENPB	P07199	599 aa	Predicted RBP	11.27	□□□□□ -0.61
MDM4-215	ENST00000614459	ERICH6	Q7L0X2	663 aa		11.25	□□□□□ -0.61
MDM4-215	ENST00000614459	ZEB1	P37275	1124 aa	Predicted RBP	11.16	□□□□□ -0.62
MDM4-215	ENST00000614459	NISCH	Q9Y2I1	1504 aa		10.9	□□□□□ -0.66
MDM4-215	ENST00000614459	NEFL	P07196	543 aa		10.86	□□□□□ -0.67
MDM4-215	ENST00000614459	SUPT5H	O00267	1087 aa	Known RBP	10.8	□□□□□ -0.68
MDM4-215	ENST00000614459	SHROOM4	Q9ULL8	1493 aa		10.75	□□□□□ -0.69
MDM4-215	ENST00000614459	MYT1L	Q9UL68	1186 aa		10.73	□□□□□ -0.69
MDM4-215	ENST00000614459	GLIPR1L2	Q4G1C9	344 aa		10.72	□□□□□ -0.69
MDM4-215	ENST00000614459	EHMT2	Q96KQ7	1210 aa		10.67	□□□□□ -0.7
MDM4-215	ENST00000614459	DAXX	Q9UER7	740 aa	Predicted RBP	10.65	□□□□□ -0.7
MDM4-215	ENST00000614459	RTL5	Q5HYW3	569 aa	Predicted RBP	10.63	□□□□□ -0.71
MDM4-215	ENST00000614459	APLP2	Q06481	763 aa		10.59	□□□□□ -0.71
MDM4-215	ENST00000614459	CLSPN	Q9HAW4	1339 aa		10.59	□□□□□ -0.71
MDM4-215	ENST00000614459	RANGAP1	P46060	587 aa	Predicted RBP	10.51	□□□□□ -0.73
MDM4-215	ENST00000614459	FAM9A	Q8IZU1	332 aa	Predicted RBP	10.48	□□□□□ -0.73
MDM4-215	ENST00000614459	ZNF316	A6NFI3	1004 aa	Predicted RBP	10.35	□□□□□ -0.75
MDM4-215	ENST00000614459	PCGF6	Q9BYE7	350 aa		10.27	□□□□□ -0.76
MDM4-215	ENST00000614459	HRC	P23327	699 aa		10.26	□□□□□ -0.77
MDM4-215	ENST00000614459	ATP1B4	Q9UN42	357 aa	Predicted RBP	10.25	□□□□□ -0.77
MDM4-215	ENST00000614459	NCL	P19338	710 aa	Known RBP	10.15	□□□□□ -0.78
MDM4-215	ENST00000614459	ANP32B	Q92688	251 aa	Known RBP	10.15	□□□□□ -0.78
MDM4-215	ENST00000614459	TRIM26	Q12899	539 aa	Predicted RBP	10.14	□□□□□ -0.79
MDM4-215	ENST00000614459	TNNT2	P45379	298 aa	Predicted RBP	10.13	□□□□□ -0.79
MDM4-215	ENST00000614459	CDK11A	Q9UQ88	783 aa	Predicted RBP	10.07	□□□□□ -0.8
MDM4-215	ENST00000614459	ANP32A	P39687	249 aa	Known RBP	10.06	□□□□□ -0.8
MDM4-215	ENST00000614459	TRIM44	Q96DX7	344 aa	Predicted RBP	10.06	□□□□□ -0.8
MDM4-215	ENST00000614459	ANP32E	Q9BTT0	268 aa		10.02	□□□□□ -0.8
MDM4-215	ENST00000614459	POLR3GL	Q9BT43	218 aa		10	□□□□□ -0.81
MDM4-215	ENST00000614459	TRIM41	Q8WV44	630 aa		9.99	□□□□□ -0.81
MDM4-215	ENST00000614459	UBTF	P17480	764 aa	Known RBP	9.98	□□□□□ -0.81
MDM4-215	ENST00000614459	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	9.94	□□□□□ -0.82
MDM4-215	ENST00000614459	HNRNPUL2	Q1KMD3	747 aa	Known RBP	9.94	□□□□□ -0.82
MDM4-215	ENST00000614459	EIF5B	O60841	1220 aa	Known RBP	9.92	□□□□□ -0.82
MDM4-215	ENST00000614459	DIEXF	Q68CQ4	756 aa	Known RBP	9.89	□□□□□ -0.83
MDM4-215	ENST00000614459	ABCC9	O60706	1549 aa		9.88	□□□□□ -0.83
MDM4-215	ENST00000614459	ARID4B	Q4LE39	1312 aa	Predicted RBP	9.87	□□□□□ -0.83
MDM4-215	ENST00000614459	NEFM	P07197	916 aa		9.87	□□□□□ -0.83
MDM4-215	ENST00000614459	CHIC1	Q5VXU3	224 aa		9.87	□□□□□ -0.83
MDM4-215	ENST00000614459	CDK11B	P21127	795 aa	Known RBP	9.87	□□□□□ -0.83
MDM4-215	ENST00000614459	PABPN1	Q86U42	306 aa	Known RBP eCLIP	9.85	□□□□□ -0.83
MDM4-215	ENST00000614459	ZNF326	Q5BKZ1	582 aa	Known RBP	9.85	□□□□□ -0.83
MDM4-215	ENST00000614459	ERICH6B	Q5W0A0	696 aa		9.85	□□□□□ -0.83
MDM4-215	ENST00000614459	ACIN1	Q9UKV3	1341 aa	Known RBP	9.85	□□□□□ -0.83
MDM4-215	ENST00000614459	GTF3C3	Q9Y5Q9	886 aa		9.81	□□□□□ -0.84
MDM4-215	ENST00000614459	PTMS	P20962	102 aa		9.8	□□□□□ -0.84
MDM4-215	ENST00000614459	ZBTB47	Q9UFB7	747 aa	Predicted RBP	9.79	□□□□□ -0.84
MDM4-215	ENST00000614459	UPF2	Q9HAU5	1272 aa	Known RBP	9.79	□□□□□ -0.84
MDM4-215	ENST00000614459	SLC24A1	O60721	1099 aa		9.77	□□□□□ -0.85
MDM4-215	ENST00000614459	DDRGK1	Q96HY6	314 aa		9.75	□□□□□ -0.85
MDM4-215	ENST00000614459	PPARGC1B	Q86YN6	1023 aa	Known RBP	9.71	□□□□□ -0.85
MDM4-215	ENST00000614459	ANP32C	O43423	234 aa		9.7	□□□□□ -0.86
MDM4-215	ENST00000614459	ITGAE	P38570	1179 aa		9.69	□□□□□ -0.86
MDM4-215	ENST00000614459	FBLN2	P98095	1184 aa		9.69	□□□□□ -0.86
MDM4-215	ENST00000614459	BECN1	Q14457	450 aa		9.64	□□□□□ -0.87
MDM4-215	ENST00000614459	NEUROD1	Q13562	356 aa		9.64	□□□□□ -0.87
MDM4-215	ENST00000614459	PPM1G	O15355	546 aa	Predicted RBP	9.64	□□□□□ -0.87
MDM4-215	ENST00000614459	LAS1L	Q9Y4W2	734 aa	Known RBP	9.64	□□□□□ -0.87
MDM4-215	ENST00000614459	CCDC180	Q9P1Z9	1646 aa		9.63	□□□□□ -0.87
MDM4-215	ENST00000614459	SLC4A1AP	Q9BWU0	796 aa	Known RBP	9.63	□□□□□ -0.87
MDM4-215	ENST00000614459	CALR	P27797	417 aa	Known RBP	9.63	□□□□□ -0.87
MDM4-215	ENST00000614459	GOLGA6L22	H0YM25	854 aa		9.62	□□□□□ -0.87
MDM4-215	ENST00000614459	DCAF1	Q9Y4B6	1507 aa		9.62	□□□□□ -0.87
MDM4-215	ENST00000614459	HSP90AA1	P07900	732 aa	Known RBP	9.62	□□□□□ -0.87
MDM4-215	ENST00000614459	USP35	Q9P2H5	1018 aa		9.61	□□□□□ -0.87
MDM4-215	ENST00000614459	GOLGA6L6	A8MZA4	724 aa		9.58	□□□□□ -0.88
MDM4-215	ENST00000614459	CHAF1A	Q13111	956 aa	Predicted RBP	9.58	□□□□□ -0.88
MDM4-215	ENST00000614459	L1TD1	Q5T7N2	865 aa	Known RBP	9.58	□□□□□ -0.88
MDM4-215	ENST00000614459	BCL11A	Q9H165	835 aa		9.58	□□□□□ -0.88
MDM4-215	ENST00000614459		A0A0U1RQG5	324 aa	Predicted RBP	9.56	□□□□□ -0.88
MDM4-215	ENST00000614459	CANX	P27824	592 aa	Known RBP	9.55	□□□□□ -0.88
MDM4-215	ENST00000614459	NRDC	O43847	1150 aa		9.55	□□□□□ -0.88
MDM4-215	ENST00000614459	CNGB1	Q14028	1251 aa	Predicted RBP	9.54	□□□□□ -0.88
MDM4-215	ENST00000614459	RSPH6A	Q9H0K4	717 aa		9.54	□□□□□ -0.88
MDM4-215	ENST00000614459	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	9.51	□□□□□ -0.89
MDM4-215	ENST00000614459	PLPPR3	Q6T4P5	718 aa		9.48	□□□□□ -0.89
MDM4-215	ENST00000614459	BCAN	Q96GW7	911 aa		9.48	□□□□□ -0.89
MDM4-215	ENST00000614459	NAP1L5	Q96NT1	182 aa	Predicted RBP	9.48	□□□□□ -0.89
MDM4-215	ENST00000614459	PNN	Q9H307	717 aa	Known RBP	9.46	□□□□□ -0.89
MDM4-215	ENST00000614459	FAM50A	Q14320	339 aa	Known RBP	9.46	□□□□□ -0.9
MDM4-215	ENST00000614459	SET	Q01105	290 aa	Predicted RBP	9.44	□□□□□ -0.9
MDM4-215	ENST00000614459	ARID3C	A6NKF2	412 aa		9.43	□□□□□ -0.9
MDM4-215	ENST00000614459	HMGB1	P09429	215 aa	Known RBP	9.43	□□□□□ -0.9
MDM4-215	ENST00000614459	TNNT3	P45378	269 aa	Predicted RBP	9.43	□□□□□ -0.9
MDM4-215	ENST00000614459	TRIM52	Q96A61	297 aa		9.43	□□□□□ -0.9
MDM4-215	ENST00000614459	CFAP44	Q96MT7	982 aa		9.42	□□□□□ -0.9
MDM4-215	ENST00000614459	GOLGA6L3	A6NEY3	463 aa		9.41	□□□□□ -0.9
MDM4-215	ENST00000614459	PTMA	P06454	111 aa	Known RBP	9.4	□□□□□ -0.9
MDM4-215	ENST00000614459	MTERF4	Q7Z6M4	381 aa	Known RBP	9.4	□□□□□ -0.9
MDM4-215	ENST00000614459	MSN	P26038	577 aa	Known RBP	9.39	□□□□□ -0.91
MDM4-215	ENST00000614459	NOP58	Q9Y2X3	529 aa	Known RBP	9.38	□□□□□ -0.91
MDM4-215	ENST00000614459	LOC105371045	A0A1W2PR82	267 aa		9.38	□□□□□ -0.91
MDM4-215	ENST00000614459	CCDC136	Q96JN2	1154 aa		9.38	□□□□□ -0.91
MDM4-215	ENST00000614459	ZRSR1	Q15695	479 aa	Known RBP	9.38	□□□□□ -0.91

Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms