RNA–Protein interactions for RNA: ENST00000557557.1

PSMC6-216, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 2

Gene PSMC6, Length 2,939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-216ENST00000557557 PELP1Q8IZL8 1130 aaKnown RBP12.35□□□□□ -0.43
PSMC6-216ENST00000557557 MYT1Q01538 1121 aa12.07□□□□□ -0.48
PSMC6-216ENST00000557557 NISCHQ9Y2I1 1504 aa11.72□□□□□ -0.53
PSMC6-216ENST00000557557 HRCP23327 699 aa11.67□□□□□ -0.54
PSMC6-216ENST00000557557 PPARGC1BQ86YN6 1023 aaKnown RBP11.55□□□□□ -0.56
PSMC6-216ENST00000557557 SCAF1Q9H7N4 1312 aaKnown RBP11.54□□□□□ -0.56
PSMC6-216ENST00000557557 PRKCSHP14314 528 aaPredicted RBP11.54□□□□□ -0.56
PSMC6-216ENST00000557557 TTBK1Q5TCY1 1321 aaPredicted RBP11.52□□□□□ -0.57
PSMC6-216ENST00000557557 BCL11AQ9H165 835 aa11.36□□□□□ -0.59
PSMC6-216ENST00000557557 FAM9AQ8IZU1 332 aaPredicted RBP11.25□□□□□ -0.61
PSMC6-216ENST00000557557 PCGF6Q9BYE7 350 aa11.19□□□□□ -0.62
PSMC6-216ENST00000557557 ERICH6Q7L0X2 663 aa11.15□□□□□ -0.63
PSMC6-216ENST00000557557 APLP2Q06481 763 aa11.07□□□□□ -0.64
PSMC6-216ENST00000557557 CENPBP07199 599 aaPredicted RBP11.02□□□□□ -0.65
PSMC6-216ENST00000557557 GTF3C3Q9Y5Q9 886 aa11□□□□□ -0.65
PSMC6-216ENST00000557557 ACIN1Q9UKV3 1341 aaKnown RBP10.97□□□□□ -0.65
PSMC6-216ENST00000557557 NEUROD1Q13562 356 aa10.96□□□□□ -0.65
PSMC6-216ENST00000557557 SLC24A1O60721 1099 aa10.85□□□□□ -0.67
PSMC6-216ENST00000557557 ANP32EQ9BTT0 268 aa10.78□□□□□ -0.68
PSMC6-216ENST00000557557 CSRNP3Q8WYN3 585 aa10.76□□□□□ -0.69
PSMC6-216ENST00000557557 ZEB1P37275 1124 aaPredicted RBP10.68□□□□□ -0.7
PSMC6-216ENST00000557557 AEBP2Q6ZN18 517 aaPredicted RBP10.63□□□□□ -0.71
PSMC6-216ENST00000557557 ANO8Q9HCE9 1232 aaPredicted RBP10.62□□□□□ -0.71
PSMC6-216ENST00000557557 MYO15BQ96JP2 1530 aa10.61□□□□□ -0.71
PSMC6-216ENST00000557557 EIF5BO60841 1220 aaKnown RBP10.56□□□□□ -0.72
PSMC6-216ENST00000557557 CHIC1Q5VXU3 224 aa10.54□□□□□ -0.72
PSMC6-216ENST00000557557 TRIM26Q12899 539 aaPredicted RBP10.48□□□□□ -0.73
PSMC6-216ENST00000557557 PLEKHG5O94827 1062 aa10.47□□□□□ -0.73
PSMC6-216ENST00000557557 YTHDC1Q96MU7 727 aaKnown RBP10.47□□□□□ -0.73
PSMC6-216ENST00000557557 DAXXQ9UER7 740 aaPredicted RBP10.44□□□□□ -0.74
PSMC6-216ENST00000557557 CCDC136Q96JN2 1154 aa10.43□□□□□ -0.74
PSMC6-216ENST00000557557 DIEXFQ68CQ4 756 aaKnown RBP10.41□□□□□ -0.74
PSMC6-216ENST00000557557 UBE2Q2Q8WVN8 375 aa10.4□□□□□ -0.74
PSMC6-216ENST00000557557 TSHZ2Q9NRE2 1034 aa10.39□□□□□ -0.75
PSMC6-216ENST00000557557 SALL2Q9Y467 1007 aaPredicted RBP10.38□□□□□ -0.75
PSMC6-216ENST00000557557 DCAF1Q9Y4B6 1507 aa10.29□□□□□ -0.76
PSMC6-216ENST00000557557 SUPT5HO00267 1087 aaKnown RBP10.29□□□□□ -0.76
PSMC6-216ENST00000557557 CCDC180Q9P1Z9 1646 aa10.28□□□□□ -0.76
PSMC6-216ENST00000557557 PODXL2Q9NZ53 605 aa10.26□□□□□ -0.77
PSMC6-216ENST00000557557 PKNOX2Q96KN3 472 aa10.25□□□□□ -0.77
PSMC6-216ENST00000557557 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.23□□□□□ -0.77
PSMC6-216ENST00000557557 SUPT16HQ9Y5B9 1047 aaKnown RBP10.23□□□□□ -0.77
PSMC6-216ENST00000557557 LOC105371045A0A1W2PR82 267 aa10.21□□□□□ -0.77
PSMC6-216ENST00000557557 DEKP35659 375 aaKnown RBP10.15□□□□□ -0.78
PSMC6-216ENST00000557557 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.1□□□□□ -0.79
PSMC6-216ENST00000557557 RTN4Q9NQC3 1192 aaKnown RBP10.1□□□□□ -0.79
PSMC6-216ENST00000557557 RBM19Q9Y4C8 960 aaKnown RBP10.09□□□□□ -0.79
PSMC6-216ENST00000557557 MSH5O43196 834 aa10.08□□□□□ -0.8
PSMC6-216ENST00000557557 CCER1Q8TC90 406 aaPredicted RBP10.08□□□□□ -0.8
PSMC6-216ENST00000557557 MIER1Q8N108 512 aa10.07□□□□□ -0.8
PSMC6-216ENST00000557557 ERICH6BQ5W0A0 696 aa10.06□□□□□ -0.8
PSMC6-216ENST00000557557 BCANQ96GW7 911 aa10.05□□□□□ -0.8
PSMC6-216ENST00000557557 TRIM41Q8WV44 630 aa10.04□□□□□ -0.8
PSMC6-216ENST00000557557 IL27Q8NEV9 243 aa10.01□□□□□ -0.81
PSMC6-216ENST00000557557 SHROOM4Q9ULL8 1493 aa9.99□□□□□ -0.81
PSMC6-216ENST00000557557 CLSPNQ9HAW4 1339 aa9.99□□□□□ -0.81
PSMC6-216ENST00000557557 MYT1LQ9UL68 1186 aa9.98□□□□□ -0.81
PSMC6-216ENST00000557557 ZNF316A6NFI3 1004 aaPredicted RBP9.96□□□□□ -0.82
PSMC6-216ENST00000557557 A0A0U1RQG5 324 aaPredicted RBP9.92□□□□□ -0.82
PSMC6-216ENST00000557557 NBR1Q14596 966 aa9.9□□□□□ -0.82
PSMC6-216ENST00000557557 ZCCHC6Q5VYS8 1495 aaKnown RBP9.88□□□□□ -0.83
PSMC6-216ENST00000557557 NEFLP07196 543 aa9.87□□□□□ -0.83
PSMC6-216ENST00000557557 ITGAEP38570 1179 aa9.87□□□□□ -0.83
PSMC6-216ENST00000557557 ZMYND15Q9H091 742 aa9.87□□□□□ -0.83
PSMC6-216ENST00000557557 TIMELESSQ9UNS1 1208 aa9.87□□□□□ -0.83
PSMC6-216ENST00000557557 PDE4CQ08493 712 aa9.85□□□□□ -0.83
PSMC6-216ENST00000557557 FKBP8Q14318 412 aa9.84□□□□□ -0.83
PSMC6-216ENST00000557557 VSIG10Q8N0Z9 540 aa9.84□□□□□ -0.83
PSMC6-216ENST00000557557 FANCIQ9NVI1 1328 aa9.8□□□□□ -0.84
PSMC6-216ENST00000557557 PDIA4P13667 645 aaKnown RBP9.79□□□□□ -0.84
PSMC6-216ENST00000557557 GLIPR1L2Q4G1C9 344 aa9.79□□□□□ -0.84
PSMC6-216ENST00000557557 FGD1P98174 961 aa9.76□□□□□ -0.85
PSMC6-216ENST00000557557 BCL11BQ9C0K0 894 aaPredicted RBP9.76□□□□□ -0.85
PSMC6-216ENST00000557557 DCAF8L2P0C7V8 631 aa9.75□□□□□ -0.85
PSMC6-216ENST00000557557 KLHL34Q8N239 644 aa9.73□□□□□ -0.85
PSMC6-216ENST00000557557 RBM10P98175 930 aaKnown RBP9.72□□□□□ -0.85
PSMC6-216ENST00000557557 RTL5Q5HYW3 569 aaPredicted RBP9.72□□□□□ -0.85
PSMC6-216ENST00000557557 AAMPQ13685 434 aa9.7□□□□□ -0.86
PSMC6-216ENST00000557557 EHMT2Q96KQ7 1210 aa9.69□□□□□ -0.86
PSMC6-216ENST00000557557 PAK3O75914 559 aaPredicted RBP9.66□□□□□ -0.86
PSMC6-216ENST00000557557 NOP58Q9Y2X3 529 aaKnown RBP9.66□□□□□ -0.86
PSMC6-216ENST00000557557 CDK11AQ9UQ88 783 aaPredicted RBP9.65□□□□□ -0.86
PSMC6-216ENST00000557557 BRPF3Q9ULD4 1205 aa9.63□□□□□ -0.87
PSMC6-216ENST00000557557 RSPH6AQ9H0K4 717 aa9.62□□□□□ -0.87
PSMC6-216ENST00000557557 KCNH8Q96L42 1107 aa9.59□□□□□ -0.87
PSMC6-216ENST00000557557 POTEDQ86YR6 584 aa9.55□□□□□ -0.88
PSMC6-216ENST00000557557 RANGAP1P46060 587 aaPredicted RBP9.53□□□□□ -0.88
PSMC6-216ENST00000557557 TAF7LQ5H9L4 462 aa9.52□□□□□ -0.88
PSMC6-216ENST00000557557 PAXIP1Q6ZW49 1069 aaPredicted RBP9.52□□□□□ -0.88
PSMC6-216ENST00000557557 C11orf95C9JLR9 678 aaPredicted RBP9.52□□□□□ -0.89
PSMC6-216ENST00000557557 NEFMP07197 916 aa9.52□□□□□ -0.89
PSMC6-216ENST00000557557 HSP90AA2PQ14568 343 aaPredicted RBP9.51□□□□□ -0.89
PSMC6-216ENST00000557557 IRX6P78412 446 aaPredicted RBP9.5□□□□□ -0.89
PSMC6-216ENST00000557557 NCBP3Q53F19 620 aaKnown RBP9.48□□□□□ -0.89
PSMC6-216ENST00000557557 TRIM52Q96A61 297 aa9.46□□□□□ -0.89
PSMC6-216ENST00000557557 ZBTB47Q9UFB7 747 aaPredicted RBP9.46□□□□□ -0.89
PSMC6-216ENST00000557557 WASHC2AQ641Q2 1341 aa9.45□□□□□ -0.9
PSMC6-216ENST00000557557 WASHC2CQ9Y4E1 1318 aa9.45□□□□□ -0.9
PSMC6-216ENST00000557557 LAS1LQ9Y4W2 734 aaKnown RBP9.44□□□□□ -0.9
PSMC6-216ENST00000557557 CHMP4BQ9H444 224 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms