Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 RHOF-204ENST00000537265 699 ntTSL 2 BASIC35.25■■■■□ 3.23
CDC42BPAQ5VT25 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC35.25■■■■□ 3.23
CDC42BPAQ5VT25 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC35.24■■■■□ 3.23
CDC42BPAQ5VT25 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC35.24■■■■□ 3.23
CDC42BPAQ5VT25 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC35.24■■■■□ 3.23
CDC42BPAQ5VT25 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
CDC42BPAQ5VT25 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC35.23■■■■□ 3.23
CDC42BPAQ5VT25 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC35.23■■■■□ 3.23
CDC42BPAQ5VT25 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC35.23■■■■□ 3.23
CDC42BPAQ5VT25 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC35.23■■■■□ 3.23
CDC42BPAQ5VT25 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC35.23■■■■□ 3.23
CDC42BPAQ5VT25 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC35.23■■■■□ 3.23
CDC42BPAQ5VT25 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
CDC42BPAQ5VT25 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC35.23■■■■□ 3.23
CDC42BPAQ5VT25 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC35.23■■■■□ 3.23
CDC42BPAQ5VT25 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC35.23■■■■□ 3.23
CDC42BPAQ5VT25 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC35.22■■■■□ 3.23
CDC42BPAQ5VT25 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
CDC42BPAQ5VT25 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC35.21■■■■□ 3.23
CDC42BPAQ5VT25 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC35.21■■■■□ 3.23
CDC42BPAQ5VT25 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC35.21■■■■□ 3.23
CDC42BPAQ5VT25 AL162430.1-201ENST00000480705 870 ntBASIC35.21■■■■□ 3.23
CDC42BPAQ5VT25 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC35.21■■■■□ 3.23
CDC42BPAQ5VT25 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC35.21■■■■□ 3.23
CDC42BPAQ5VT25 DUSP8P4-201ENST00000399538 1761 ntBASIC35.21■■■■□ 3.23
CDC42BPAQ5VT25 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC35.21■■■■□ 3.23
CDC42BPAQ5VT25 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC35.21■■■■□ 3.23
CDC42BPAQ5VT25 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC35.2■■■■□ 3.23
CDC42BPAQ5VT25 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC35.2■■■■□ 3.23
CDC42BPAQ5VT25 NKILA-201ENST00000613231 537 ntTSL 4 BASIC35.2■■■■□ 3.23
CDC42BPAQ5VT25 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC35.2■■■■□ 3.22
CDC42BPAQ5VT25 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC35.19■■■■□ 3.22
CDC42BPAQ5VT25 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC35.19■■■■□ 3.22
CDC42BPAQ5VT25 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC35.19■■■■□ 3.22
CDC42BPAQ5VT25 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC35.18■■■■□ 3.22
CDC42BPAQ5VT25 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC35.18■■■■□ 3.22
CDC42BPAQ5VT25 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC35.18■■■■□ 3.22
CDC42BPAQ5VT25 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC35.18■■■■□ 3.22
CDC42BPAQ5VT25 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
CDC42BPAQ5VT25 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
CDC42BPAQ5VT25 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC35.16■■■■□ 3.22
CDC42BPAQ5VT25 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC35.16■■■■□ 3.22
CDC42BPAQ5VT25 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC35.16■■■■□ 3.22
CDC42BPAQ5VT25 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC35.16■■■■□ 3.22
CDC42BPAQ5VT25 AC008764.7-201ENST00000593779 1081 ntBASIC35.16■■■■□ 3.22
CDC42BPAQ5VT25 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
CDC42BPAQ5VT25 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC35.16■■■■□ 3.22
CDC42BPAQ5VT25 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC35.15■■■■□ 3.22
CDC42BPAQ5VT25 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC35.15■■■■□ 3.22
CDC42BPAQ5VT25 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC35.15■■■■□ 3.22
CDC42BPAQ5VT25 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC35.15■■■■□ 3.22
CDC42BPAQ5VT25 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC35.14■■■■□ 3.22
CDC42BPAQ5VT25 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC35.14■■■■□ 3.22
CDC42BPAQ5VT25 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC35.14■■■■□ 3.22
CDC42BPAQ5VT25 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC35.14■■■■□ 3.22
CDC42BPAQ5VT25 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC35.14■■■■□ 3.22
CDC42BPAQ5VT25 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC35.14■■■■□ 3.22
CDC42BPAQ5VT25 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC35.13■■■■□ 3.21
CDC42BPAQ5VT25 JTB-203ENST00000368589 1216 ntTSL 2 BASIC35.13■■■■□ 3.21
CDC42BPAQ5VT25 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC35.13■■■■□ 3.21
CDC42BPAQ5VT25 HES6-206ENST00000409574 738 ntTSL 2 BASIC35.13■■■■□ 3.21
CDC42BPAQ5VT25 AC241377.3-202ENST00000626088 1088 ntBASIC35.13■■■■□ 3.21
CDC42BPAQ5VT25 AC241585.3-202ENST00000628937 1088 ntBASIC35.13■■■■□ 3.21
CDC42BPAQ5VT25 AC245100.8-202ENST00000629247 1058 ntBASIC35.13■■■■□ 3.21
CDC42BPAQ5VT25 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC35.13■■■■□ 3.21
CDC42BPAQ5VT25 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC35.13■■■■□ 3.21
CDC42BPAQ5VT25 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC35.12■■■■□ 3.21
CDC42BPAQ5VT25 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC35.12■■■■□ 3.21
CDC42BPAQ5VT25 AL022069.1-201ENST00000568025 1636 ntBASIC35.12■■■■□ 3.21
CDC42BPAQ5VT25 HACD1-201ENST00000326961 773 ntTSL 2 BASIC35.12■■■■□ 3.21
CDC42BPAQ5VT25 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC35.11■■■■□ 3.21
CDC42BPAQ5VT25 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC35.11■■■■□ 3.21
CDC42BPAQ5VT25 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC35.11■■■■□ 3.21
CDC42BPAQ5VT25 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
CDC42BPAQ5VT25 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC35.11■■■■□ 3.21
CDC42BPAQ5VT25 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC35.1■■■■□ 3.21
CDC42BPAQ5VT25 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC35.1■■■■□ 3.21
CDC42BPAQ5VT25 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC35.1■■■■□ 3.21
CDC42BPAQ5VT25 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC35.09■■■■□ 3.21
CDC42BPAQ5VT25 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC35.09■■■■□ 3.21
CDC42BPAQ5VT25 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC35.09■■■■□ 3.21
CDC42BPAQ5VT25 IRS3P-201ENST00000223076 1006 ntBASIC35.09■■■■□ 3.21
CDC42BPAQ5VT25 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC35.09■■■■□ 3.21
CDC42BPAQ5VT25 LSR-205ENST00000427250 1606 ntTSL 2 BASIC35.08■■■■□ 3.21
CDC42BPAQ5VT25 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC35.08■■■■□ 3.21
CDC42BPAQ5VT25 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC35.08■■■■□ 3.21
CDC42BPAQ5VT25 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC35.08■■■■□ 3.21
CDC42BPAQ5VT25 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC35.07■■■■□ 3.2
CDC42BPAQ5VT25 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.2
CDC42BPAQ5VT25 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC35.07■■■■□ 3.2
CDC42BPAQ5VT25 USF2-207ENST00000595068 1612 ntTSL 5 BASIC35.07■■■■□ 3.2
CDC42BPAQ5VT25 CEBPA-AS1-201ENST00000592982 2198 ntBASIC35.07■■■■□ 3.2
CDC42BPAQ5VT25 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
CDC42BPAQ5VT25 SLC47A1P1-202ENST00000449666 945 ntBASIC35.06■■■■□ 3.2
CDC42BPAQ5VT25 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC35.06■■■■□ 3.2
CDC42BPAQ5VT25 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC35.06■■■■□ 3.2
CDC42BPAQ5VT25 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC35.06■■■■□ 3.2
CDC42BPAQ5VT25 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC35.06■■■■□ 3.2
CDC42BPAQ5VT25 AC009086.3-201ENST00000623486 1008 ntBASIC35.06■■■■□ 3.2
CDC42BPAQ5VT25 AL031602.1-201ENST00000633169 911 ntBASIC35.05■■■■□ 3.2
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms