Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
SLC6A12P48065 AC004448.1-201ENST00000458332 883 ntBASIC22.18■■□□□ 1.14
SLC6A12P48065 AC137630.3-201ENST00000607245 391 ntBASIC22.18■■□□□ 1.14
SLC6A12P48065 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SLC6A12P48065 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SLC6A12P48065 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SLC6A12P48065 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SLC6A12P48065 ALDH1A3-203ENST00000557963 1670 ntBASIC22.17■■□□□ 1.14
SLC6A12P48065 EI24-204ENST00000527235 1625 ntTSL 5 BASIC22.17■■□□□ 1.14
SLC6A12P48065 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SLC6A12P48065 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
SLC6A12P48065 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SLC6A12P48065 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC22.17■■□□□ 1.14
SLC6A12P48065 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SLC6A12P48065 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
SLC6A12P48065 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SLC6A12P48065 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC22.15■■□□□ 1.14
SLC6A12P48065 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SLC6A12P48065 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SLC6A12P48065 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
SLC6A12P48065 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC22.15■■□□□ 1.14
SLC6A12P48065 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC22.15■■□□□ 1.14
SLC6A12P48065 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.15■■□□□ 1.14
SLC6A12P48065 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SLC6A12P48065 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SLC6A12P48065 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
SLC6A12P48065 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
SLC6A12P48065 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
SLC6A12P48065 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
SLC6A12P48065 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SLC6A12P48065 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SLC6A12P48065 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC22.14■■□□□ 1.13
SLC6A12P48065 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC22.14■■□□□ 1.13
SLC6A12P48065 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
SLC6A12P48065 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC22.14■■□□□ 1.13
SLC6A12P48065 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
SLC6A12P48065 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SLC6A12P48065 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SLC6A12P48065 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
SLC6A12P48065 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SLC6A12P48065 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SLC6A12P48065 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC22.13■■□□□ 1.13
SLC6A12P48065 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC22.13■■□□□ 1.13
SLC6A12P48065 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SLC6A12P48065 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC22.13■■□□□ 1.13
SLC6A12P48065 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SLC6A12P48065 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
SLC6A12P48065 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
SLC6A12P48065 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC22.12■■□□□ 1.13
SLC6A12P48065 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
SLC6A12P48065 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
SLC6A12P48065 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SLC6A12P48065 SENP5-202ENST00000419026 973 ntTSL 3 BASIC22.12■■□□□ 1.13
SLC6A12P48065 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.12■■□□□ 1.13
SLC6A12P48065 RARRES2P1-201ENST00000474487 481 ntBASIC22.12■■□□□ 1.13
SLC6A12P48065 PRTG-204ENST00000561292 833 ntTSL 3 BASIC22.12■■□□□ 1.13
SLC6A12P48065 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC22.12■■□□□ 1.13
SLC6A12P48065 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC22.12■■□□□ 1.13
SLC6A12P48065 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC22.12■■□□□ 1.13
SLC6A12P48065 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SLC6A12P48065 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
SLC6A12P48065 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SLC6A12P48065 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC22.11■■□□□ 1.13
SLC6A12P48065 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SLC6A12P48065 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SLC6A12P48065 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC22.11■■□□□ 1.13
SLC6A12P48065 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SLC6A12P48065 TK2-202ENST00000417693 1046 ntTSL 2 BASIC22.11■■□□□ 1.13
SLC6A12P48065 SNX5-217ENST00000606557 1087 ntBASIC22.11■■□□□ 1.13
SLC6A12P48065 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC22.11■■□□□ 1.13
SLC6A12P48065 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.11■■□□□ 1.13
SLC6A12P48065 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.11■■□□□ 1.13
SLC6A12P48065 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SLC6A12P48065 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SLC6A12P48065 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SLC6A12P48065 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.1■■□□□ 1.13
SLC6A12P48065 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
SLC6A12P48065 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
SLC6A12P48065 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SLC6A12P48065 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SLC6A12P48065 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.1■■□□□ 1.13
SLC6A12P48065 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
SLC6A12P48065 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22.09■■□□□ 1.13
SLC6A12P48065 LSM7-203ENST00000585409 512 ntTSL 2 BASIC22.09■■□□□ 1.13
SLC6A12P48065 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SLC6A12P48065 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SLC6A12P48065 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
SLC6A12P48065 AC021242.3-201ENST00000607598 1377 ntBASIC22.09■■□□□ 1.13
SLC6A12P48065 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SLC6A12P48065 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC22.09■■□□□ 1.13
SLC6A12P48065 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC22.08■■□□□ 1.13
SLC6A12P48065 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SLC6A12P48065 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
SLC6A12P48065 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.08■■□□□ 1.13
SLC6A12P48065 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
SLC6A12P48065 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
SLC6A12P48065 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC22.08■■□□□ 1.13
SLC6A12P48065 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC22.08■■□□□ 1.13
SLC6A12P48065 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC22.08■■□□□ 1.13
SLC6A12P48065 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC22.08■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms