Protein–RNA interactions for Protein: O75437

ZNF254, Zinc finger protein 254, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF254O75437 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF254O75437 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.19■□□□□ 0.82
ZNF254O75437 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF254O75437 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF254O75437 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF254O75437 LONRF2P2-201ENST00000439212 571 ntBASIC20.18■□□□□ 0.82
ZNF254O75437 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.18■□□□□ 0.82
ZNF254O75437 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
ZNF254O75437 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.18■□□□□ 0.82
ZNF254O75437 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.18■□□□□ 0.82
ZNF254O75437 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF254O75437 C9orf163-202ENST00000624034 2573 ntBASIC20.18■□□□□ 0.82
ZNF254O75437 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF254O75437 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.18■□□□□ 0.82
ZNF254O75437 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
ZNF254O75437 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF254O75437 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.18■□□□□ 0.82
ZNF254O75437 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF254O75437 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF254O75437 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF254O75437 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF254O75437 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.17■□□□□ 0.82
ZNF254O75437 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF254O75437 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF254O75437 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
ZNF254O75437 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
ZNF254O75437 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF254O75437 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF254O75437 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF254O75437 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.16■□□□□ 0.82
ZNF254O75437 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF254O75437 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF254O75437 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
ZNF254O75437 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF254O75437 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF254O75437 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.16■□□□□ 0.82
ZNF254O75437 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF254O75437 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF254O75437 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.16■□□□□ 0.82
ZNF254O75437 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
ZNF254O75437 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF254O75437 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF254O75437 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.15■□□□□ 0.82
ZNF254O75437 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF254O75437 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.15■□□□□ 0.82
ZNF254O75437 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF254O75437 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF254O75437 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF254O75437 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF254O75437 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF254O75437 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZNF254O75437 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZNF254O75437 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZNF254O75437 AC011551.1-201ENST00000614101 683 ntBASIC20.14■□□□□ 0.81
ZNF254O75437 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZNF254O75437 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZNF254O75437 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZNF254O75437 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ZNF254O75437 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
ZNF254O75437 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
ZNF254O75437 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZNF254O75437 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZNF254O75437 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZNF254O75437 U85056.1-201ENST00000616429 682 ntBASIC20.13■□□□□ 0.81
ZNF254O75437 AC129492.7-201ENST00000622992 756 ntBASIC20.13■□□□□ 0.81
ZNF254O75437 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.13■□□□□ 0.81
ZNF254O75437 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
ZNF254O75437 AL022069.1-201ENST00000568025 1636 ntBASIC20.13■□□□□ 0.81
ZNF254O75437 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF254O75437 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
ZNF254O75437 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF254O75437 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.12■□□□□ 0.81
ZNF254O75437 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF254O75437 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.12■□□□□ 0.81
ZNF254O75437 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF254O75437 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
ZNF254O75437 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
ZNF254O75437 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
ZNF254O75437 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ZNF254O75437 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZNF254O75437 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ZNF254O75437 AC022616.5-201ENST00000518796 181 ntBASIC20.11■□□□□ 0.81
ZNF254O75437 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.11■□□□□ 0.81
ZNF254O75437 HSD17B1P1-201ENST00000590052 955 ntBASIC20.11■□□□□ 0.81
ZNF254O75437 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.11■□□□□ 0.81
ZNF254O75437 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.11■□□□□ 0.81
ZNF254O75437 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ZNF254O75437 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
ZNF254O75437 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF254O75437 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF254O75437 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF254O75437 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.1■□□□□ 0.81
ZNF254O75437 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
ZNF254O75437 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
ZNF254O75437 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.1■□□□□ 0.81
ZNF254O75437 AC019171.1-201ENST00000601251 1056 ntBASIC20.1■□□□□ 0.81
ZNF254O75437 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
ZNF254O75437 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF254O75437 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF254O75437 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms