Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV13-1A0A0B4J241 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV13-1A0A0B4J241 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC15.87■□□□□ 0.13
TRAV13-1A0A0B4J241 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV13-1A0A0B4J241 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV13-1A0A0B4J241 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV13-1A0A0B4J241 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV13-1A0A0B4J241 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV13-1A0A0B4J241 KRT18P10-201ENST00000388836 1287 ntBASIC15.86■□□□□ 0.13
TRAV13-1A0A0B4J241 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC15.86■□□□□ 0.13
TRAV13-1A0A0B4J241 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC15.86■□□□□ 0.13
TRAV13-1A0A0B4J241 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC15.86■□□□□ 0.13
TRAV13-1A0A0B4J241 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV13-1A0A0B4J241 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV13-1A0A0B4J241 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
TRAV13-1A0A0B4J241 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV13-1A0A0B4J241 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV13-1A0A0B4J241 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
TRAV13-1A0A0B4J241 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV13-1A0A0B4J241 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV13-1A0A0B4J241 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV13-1A0A0B4J241 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV13-1A0A0B4J241 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV13-1A0A0B4J241 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV13-1A0A0B4J241 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV13-1A0A0B4J241 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV13-1A0A0B4J241 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV13-1A0A0B4J241 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC15.84■□□□□ 0.13
TRAV13-1A0A0B4J241 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV13-1A0A0B4J241 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV13-1A0A0B4J241 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TRAV13-1A0A0B4J241 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC15.84■□□□□ 0.13
TRAV13-1A0A0B4J241 AC079834.2-201ENST00000609776 1949 ntBASIC15.84■□□□□ 0.13
TRAV13-1A0A0B4J241 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRAV13-1A0A0B4J241 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRAV13-1A0A0B4J241 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRAV13-1A0A0B4J241 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC15.83■□□□□ 0.13
TRAV13-1A0A0B4J241 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRAV13-1A0A0B4J241 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC15.83■□□□□ 0.13
TRAV13-1A0A0B4J241 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRAV13-1A0A0B4J241 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC15.83■□□□□ 0.12
TRAV13-1A0A0B4J241 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
TRAV13-1A0A0B4J241 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV13-1A0A0B4J241 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
TRAV13-1A0A0B4J241 AC007029.1-201ENST00000604183 313 ntBASIC15.83■□□□□ 0.12
TRAV13-1A0A0B4J241 MIR7108-201ENST00000614319 87 ntBASIC15.83■□□□□ 0.12
TRAV13-1A0A0B4J241 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV13-1A0A0B4J241 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV13-1A0A0B4J241 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV13-1A0A0B4J241 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV13-1A0A0B4J241 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV13-1A0A0B4J241 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV13-1A0A0B4J241 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC15.82■□□□□ 0.12
TRAV13-1A0A0B4J241 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV13-1A0A0B4J241 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV13-1A0A0B4J241 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV13-1A0A0B4J241 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV13-1A0A0B4J241 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC15.82■□□□□ 0.12
TRAV13-1A0A0B4J241 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV13-1A0A0B4J241 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV13-1A0A0B4J241 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
TRAV13-1A0A0B4J241 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV13-1A0A0B4J241 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV13-1A0A0B4J241 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TRAV13-1A0A0B4J241 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
TRAV13-1A0A0B4J241 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV13-1A0A0B4J241 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV13-1A0A0B4J241 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
TRAV13-1A0A0B4J241 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC15.81■□□□□ 0.12
TRAV13-1A0A0B4J241 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV13-1A0A0B4J241 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC15.81■□□□□ 0.12
TRAV13-1A0A0B4J241 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
TRAV13-1A0A0B4J241 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TRAV13-1A0A0B4J241 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV13-1A0A0B4J241 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TRAV13-1A0A0B4J241 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV13-1A0A0B4J241 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TRAV13-1A0A0B4J241 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TRAV13-1A0A0B4J241 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV13-1A0A0B4J241 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV13-1A0A0B4J241 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV13-1A0A0B4J241 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV13-1A0A0B4J241 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV13-1A0A0B4J241 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV13-1A0A0B4J241 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV13-1A0A0B4J241 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV13-1A0A0B4J241 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV13-1A0A0B4J241 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC15.79■□□□□ 0.12
TRAV13-1A0A0B4J241 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV13-1A0A0B4J241 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAV13-1A0A0B4J241 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV13-1A0A0B4J241 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV13-1A0A0B4J241 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV13-1A0A0B4J241 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TRAV13-1A0A0B4J241 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAV13-1A0A0B4J241 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV13-1A0A0B4J241 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV13-1A0A0B4J241 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
TRAV13-1A0A0B4J241 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV13-1A0A0B4J241 MIR639-201ENST00000384974 98 ntBASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms