Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CSNK1G1Q9HCP0 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC24.25■■□□□ 1.47
CSNK1G1Q9HCP0 TMEM202-AS1-202ENST00000565181 2325 ntBASIC24.25■■□□□ 1.47
CSNK1G1Q9HCP0 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CSNK1G1Q9HCP0 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CSNK1G1Q9HCP0 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC24.24■■□□□ 1.47
CSNK1G1Q9HCP0 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CSNK1G1Q9HCP0 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CSNK1G1Q9HCP0 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC24.24■■□□□ 1.47
CSNK1G1Q9HCP0 TFPT-201ENST00000391757 774 ntTSL 5 BASIC24.24■■□□□ 1.47
CSNK1G1Q9HCP0 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
CSNK1G1Q9HCP0 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC24.24■■□□□ 1.47
CSNK1G1Q9HCP0 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CSNK1G1Q9HCP0 AC135731.1-201ENST00000569415 2548 ntBASIC24.23■■□□□ 1.47
CSNK1G1Q9HCP0 AL117332.1-201ENST00000622628 974 ntBASIC24.23■■□□□ 1.47
CSNK1G1Q9HCP0 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
CSNK1G1Q9HCP0 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
CSNK1G1Q9HCP0 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
CSNK1G1Q9HCP0 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CSNK1G1Q9HCP0 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CSNK1G1Q9HCP0 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC24.23■■□□□ 1.47
CSNK1G1Q9HCP0 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CSNK1G1Q9HCP0 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
CSNK1G1Q9HCP0 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CSNK1G1Q9HCP0 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CSNK1G1Q9HCP0 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC24.22■■□□□ 1.47
CSNK1G1Q9HCP0 MIR3621-201ENST00000580529 85 ntBASIC24.22■■□□□ 1.47
CSNK1G1Q9HCP0 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.22■■□□□ 1.47
CSNK1G1Q9HCP0 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CSNK1G1Q9HCP0 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
CSNK1G1Q9HCP0 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
CSNK1G1Q9HCP0 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CSNK1G1Q9HCP0 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CSNK1G1Q9HCP0 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC24.21■■□□□ 1.47
CSNK1G1Q9HCP0 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC24.21■■□□□ 1.47
CSNK1G1Q9HCP0 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CSNK1G1Q9HCP0 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
CSNK1G1Q9HCP0 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
CSNK1G1Q9HCP0 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC24.21■■□□□ 1.47
CSNK1G1Q9HCP0 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
CSNK1G1Q9HCP0 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC24.2■■□□□ 1.46
CSNK1G1Q9HCP0 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CSNK1G1Q9HCP0 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC24.2■■□□□ 1.46
CSNK1G1Q9HCP0 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC24.2■■□□□ 1.46
CSNK1G1Q9HCP0 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC24.2■■□□□ 1.46
CSNK1G1Q9HCP0 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC24.2■■□□□ 1.46
CSNK1G1Q9HCP0 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC24.2■■□□□ 1.46
CSNK1G1Q9HCP0 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
CSNK1G1Q9HCP0 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CSNK1G1Q9HCP0 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC24.18■■□□□ 1.46
CSNK1G1Q9HCP0 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CSNK1G1Q9HCP0 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC24.18■■□□□ 1.46
CSNK1G1Q9HCP0 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CSNK1G1Q9HCP0 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
CSNK1G1Q9HCP0 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CSNK1G1Q9HCP0 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CSNK1G1Q9HCP0 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CSNK1G1Q9HCP0 REST-206ENST00000612429 1376 ntTSL 5 BASIC24.17■■□□□ 1.46
CSNK1G1Q9HCP0 REST-207ENST00000616975 1370 ntTSL 5 BASIC24.17■■□□□ 1.46
CSNK1G1Q9HCP0 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CSNK1G1Q9HCP0 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC24.17■■□□□ 1.46
CSNK1G1Q9HCP0 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
CSNK1G1Q9HCP0 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC24.17■■□□□ 1.46
CSNK1G1Q9HCP0 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CSNK1G1Q9HCP0 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CSNK1G1Q9HCP0 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
CSNK1G1Q9HCP0 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CSNK1G1Q9HCP0 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CSNK1G1Q9HCP0 AL139125.2-201ENST00000623134 1869 ntBASIC24.16■■□□□ 1.46
CSNK1G1Q9HCP0 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CSNK1G1Q9HCP0 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC24.16■■□□□ 1.46
CSNK1G1Q9HCP0 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC24.16■■□□□ 1.46
CSNK1G1Q9HCP0 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC24.16■■□□□ 1.46
CSNK1G1Q9HCP0 AL356740.2-201ENST00000601559 647 ntBASIC24.16■■□□□ 1.46
CSNK1G1Q9HCP0 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CSNK1G1Q9HCP0 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CSNK1G1Q9HCP0 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CSNK1G1Q9HCP0 AC005703.6-201ENST00000623265 1329 ntBASIC24.15■■□□□ 1.46
CSNK1G1Q9HCP0 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
CSNK1G1Q9HCP0 RPP21-222ENST00000433076 577 ntTSL 2 BASIC24.15■■□□□ 1.46
CSNK1G1Q9HCP0 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC24.15■■□□□ 1.46
CSNK1G1Q9HCP0 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC24.15■■□□□ 1.46
CSNK1G1Q9HCP0 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC24.15■■□□□ 1.46
CSNK1G1Q9HCP0 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CSNK1G1Q9HCP0 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CSNK1G1Q9HCP0 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CSNK1G1Q9HCP0 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CSNK1G1Q9HCP0 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
CSNK1G1Q9HCP0 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
CSNK1G1Q9HCP0 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
CSNK1G1Q9HCP0 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
CSNK1G1Q9HCP0 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
CSNK1G1Q9HCP0 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
CSNK1G1Q9HCP0 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CSNK1G1Q9HCP0 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
CSNK1G1Q9HCP0 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CSNK1G1Q9HCP0 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CSNK1G1Q9HCP0 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
CSNK1G1Q9HCP0 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CSNK1G1Q9HCP0 AK3-203ENST00000447596 705 ntTSL 2 BASIC24.13■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms