Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC30.26■■■□□ 2.44
PCDH11XQ9BZA7 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC30.26■■■□□ 2.44
PCDH11XQ9BZA7 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC30.26■■■□□ 2.44
PCDH11XQ9BZA7 MIR6821-201ENST00000617625 74 ntBASIC30.26■■■□□ 2.44
PCDH11XQ9BZA7 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC30.26■■■□□ 2.43
PCDH11XQ9BZA7 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
PCDH11XQ9BZA7 AC027682.1-201ENST00000562846 899 ntBASIC30.25■■■□□ 2.43
PCDH11XQ9BZA7 MAG-206ENST00000597035 542 ntTSL 4 BASIC30.25■■■□□ 2.43
PCDH11XQ9BZA7 AC099791.2-201ENST00000605725 427 ntBASIC30.25■■■□□ 2.43
PCDH11XQ9BZA7 CA15P2-201ENST00000611168 834 ntBASIC30.25■■■□□ 2.43
PCDH11XQ9BZA7 AC011298.3-201ENST00000615796 283 ntBASIC30.25■■■□□ 2.43
PCDH11XQ9BZA7 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC30.25■■■□□ 2.43
PCDH11XQ9BZA7 RASA4CP-201ENST00000424092 1398 ntBASIC30.25■■■□□ 2.43
PCDH11XQ9BZA7 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
PCDH11XQ9BZA7 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC30.24■■■□□ 2.43
PCDH11XQ9BZA7 AL138724.1-201ENST00000606771 1088 ntBASIC30.24■■■□□ 2.43
PCDH11XQ9BZA7 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
PCDH11XQ9BZA7 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
PCDH11XQ9BZA7 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC30.23■■■□□ 2.43
PCDH11XQ9BZA7 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
PCDH11XQ9BZA7 MIR6089-201ENST00000616698 64 ntBASIC30.23■■■□□ 2.43
PCDH11XQ9BZA7 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC30.23■■■□□ 2.43
PCDH11XQ9BZA7 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
PCDH11XQ9BZA7 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
PCDH11XQ9BZA7 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC30.23■■■□□ 2.43
PCDH11XQ9BZA7 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
PCDH11XQ9BZA7 ANKRD20A6P-201ENST00000618763 204 ntBASIC30.22■■■□□ 2.43
PCDH11XQ9BZA7 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
PCDH11XQ9BZA7 AC009102.2-201ENST00000606772 1639 ntBASIC30.22■■■□□ 2.43
PCDH11XQ9BZA7 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
PCDH11XQ9BZA7 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
PCDH11XQ9BZA7 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
PCDH11XQ9BZA7 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
PCDH11XQ9BZA7 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC30.22■■■□□ 2.43
PCDH11XQ9BZA7 AC097381.1-201ENST00000429019 1296 ntBASIC30.22■■■□□ 2.43
PCDH11XQ9BZA7 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC30.21■■■□□ 2.43
PCDH11XQ9BZA7 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
PCDH11XQ9BZA7 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC30.21■■■□□ 2.43
PCDH11XQ9BZA7 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
PCDH11XQ9BZA7 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC30.21■■■□□ 2.43
PCDH11XQ9BZA7 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC30.21■■■□□ 2.43
PCDH11XQ9BZA7 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC30.21■■■□□ 2.43
PCDH11XQ9BZA7 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC30.21■■■□□ 2.43
PCDH11XQ9BZA7 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC30.2■■■□□ 2.43
PCDH11XQ9BZA7 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
PCDH11XQ9BZA7 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
PCDH11XQ9BZA7 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC30.2■■■□□ 2.42
PCDH11XQ9BZA7 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
PCDH11XQ9BZA7 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
PCDH11XQ9BZA7 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
PCDH11XQ9BZA7 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC30.19■■■□□ 2.42
PCDH11XQ9BZA7 SLC6A10P-202ENST00000431994 2058 ntBASIC30.19■■■□□ 2.42
PCDH11XQ9BZA7 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC30.19■■■□□ 2.42
PCDH11XQ9BZA7 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC30.19■■■□□ 2.42
PCDH11XQ9BZA7 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC30.19■■■□□ 2.42
PCDH11XQ9BZA7 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC30.19■■■□□ 2.42
PCDH11XQ9BZA7 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
PCDH11XQ9BZA7 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC30.18■■■□□ 2.42
PCDH11XQ9BZA7 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
PCDH11XQ9BZA7 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
PCDH11XQ9BZA7 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC30.17■■■□□ 2.42
PCDH11XQ9BZA7 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
PCDH11XQ9BZA7 C17orf82-201ENST00000623772 1530 ntBASIC30.17■■■□□ 2.42
PCDH11XQ9BZA7 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
PCDH11XQ9BZA7 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
PCDH11XQ9BZA7 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC30.17■■■□□ 2.42
PCDH11XQ9BZA7 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC30.17■■■□□ 2.42
PCDH11XQ9BZA7 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC30.17■■■□□ 2.42
PCDH11XQ9BZA7 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC30.17■■■□□ 2.42
PCDH11XQ9BZA7 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC30.16■■■□□ 2.42
PCDH11XQ9BZA7 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC30.15■■■□□ 2.42
PCDH11XQ9BZA7 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
PCDH11XQ9BZA7 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC30.15■■■□□ 2.42
PCDH11XQ9BZA7 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
PCDH11XQ9BZA7 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
PCDH11XQ9BZA7 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
PCDH11XQ9BZA7 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC30.15■■■□□ 2.42
PCDH11XQ9BZA7 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC30.15■■■□□ 2.42
PCDH11XQ9BZA7 AL022069.1-201ENST00000568025 1636 ntBASIC30.15■■■□□ 2.42
PCDH11XQ9BZA7 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC30.15■■■□□ 2.42
PCDH11XQ9BZA7 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
PCDH11XQ9BZA7 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC30.14■■■□□ 2.42
PCDH11XQ9BZA7 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC30.14■■■□□ 2.42
PCDH11XQ9BZA7 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC30.14■■■□□ 2.42
PCDH11XQ9BZA7 AC087623.3-201ENST00000607047 1098 ntBASIC30.14■■■□□ 2.42
PCDH11XQ9BZA7 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
PCDH11XQ9BZA7 PARL-206ENST00000435888 1098 ntTSL 5 BASIC30.13■■■□□ 2.41
PCDH11XQ9BZA7 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC30.13■■■□□ 2.41
PCDH11XQ9BZA7 PLD4-205ENST00000553861 667 ntTSL 2 BASIC30.13■■■□□ 2.41
PCDH11XQ9BZA7 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
PCDH11XQ9BZA7 AC008764.7-201ENST00000593779 1081 ntBASIC30.13■■■□□ 2.41
PCDH11XQ9BZA7 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
PCDH11XQ9BZA7 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
PCDH11XQ9BZA7 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC30.12■■■□□ 2.41
PCDH11XQ9BZA7 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
PCDH11XQ9BZA7 AC099791.1-201ENST00000416440 715 ntBASIC30.12■■■□□ 2.41
PCDH11XQ9BZA7 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC30.12■■■□□ 2.41
PCDH11XQ9BZA7 AC136469.2-201ENST00000623944 1028 ntBASIC30.12■■■□□ 2.41
PCDH11XQ9BZA7 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
PCDH11XQ9BZA7 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms