Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.84■□□□□ 0.93
SNRNP40Q96DI7 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SNRNP40Q96DI7 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SNRNP40Q96DI7 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
SNRNP40Q96DI7 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.83■□□□□ 0.93
SNRNP40Q96DI7 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SNRNP40Q96DI7 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.83■□□□□ 0.93
SNRNP40Q96DI7 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SNRNP40Q96DI7 AC011298.3-201ENST00000615796 283 ntBASIC20.83■□□□□ 0.93
SNRNP40Q96DI7 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.83■□□□□ 0.93
SNRNP40Q96DI7 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.83■□□□□ 0.93
SNRNP40Q96DI7 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SNRNP40Q96DI7 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SNRNP40Q96DI7 IRS3P-201ENST00000223076 1006 ntBASIC20.82■□□□□ 0.92
SNRNP40Q96DI7 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SNRNP40Q96DI7 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.82■□□□□ 0.92
SNRNP40Q96DI7 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.82■□□□□ 0.92
SNRNP40Q96DI7 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.82■□□□□ 0.92
SNRNP40Q96DI7 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.82■□□□□ 0.92
SNRNP40Q96DI7 AL138724.1-201ENST00000606771 1088 ntBASIC20.82■□□□□ 0.92
SNRNP40Q96DI7 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
SNRNP40Q96DI7 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SNRNP40Q96DI7 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SNRNP40Q96DI7 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.81■□□□□ 0.92
SNRNP40Q96DI7 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SNRNP40Q96DI7 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.81■□□□□ 0.92
SNRNP40Q96DI7 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.81■□□□□ 0.92
SNRNP40Q96DI7 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.81■□□□□ 0.92
SNRNP40Q96DI7 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNRNP40Q96DI7 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SNRNP40Q96DI7 AC099791.1-201ENST00000416440 715 ntBASIC20.8■□□□□ 0.92
SNRNP40Q96DI7 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SNRNP40Q96DI7 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.8■□□□□ 0.92
SNRNP40Q96DI7 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SNRNP40Q96DI7 AC010501.1-201ENST00000606270 1962 ntBASIC20.79■□□□□ 0.92
SNRNP40Q96DI7 AC131274.2-201ENST00000580697 1507 ntBASIC20.79■□□□□ 0.92
SNRNP40Q96DI7 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SNRNP40Q96DI7 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.79■□□□□ 0.92
SNRNP40Q96DI7 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SNRNP40Q96DI7 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.79■□□□□ 0.92
SNRNP40Q96DI7 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNRNP40Q96DI7 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.78■□□□□ 0.92
SNRNP40Q96DI7 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.78■□□□□ 0.92
SNRNP40Q96DI7 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
SNRNP40Q96DI7 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.78■□□□□ 0.92
SNRNP40Q96DI7 AC009102.2-201ENST00000606772 1639 ntBASIC20.78■□□□□ 0.92
SNRNP40Q96DI7 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNRNP40Q96DI7 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
SNRNP40Q96DI7 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNRNP40Q96DI7 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.77■□□□□ 0.92
SNRNP40Q96DI7 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNRNP40Q96DI7 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SNRNP40Q96DI7 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.77■□□□□ 0.92
SNRNP40Q96DI7 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.77■□□□□ 0.92
SNRNP40Q96DI7 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.77■□□□□ 0.92
SNRNP40Q96DI7 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.77■□□□□ 0.92
SNRNP40Q96DI7 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.77■□□□□ 0.92
SNRNP40Q96DI7 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.77■□□□□ 0.92
SNRNP40Q96DI7 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SNRNP40Q96DI7 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.77■□□□□ 0.91
SNRNP40Q96DI7 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SNRNP40Q96DI7 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SNRNP40Q96DI7 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.76■□□□□ 0.91
SNRNP40Q96DI7 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.76■□□□□ 0.91
SNRNP40Q96DI7 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.76■□□□□ 0.91
SNRNP40Q96DI7 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SNRNP40Q96DI7 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SNRNP40Q96DI7 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SNRNP40Q96DI7 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
SNRNP40Q96DI7 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.75■□□□□ 0.91
SNRNP40Q96DI7 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SNRNP40Q96DI7 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.75■□□□□ 0.91
SNRNP40Q96DI7 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNRNP40Q96DI7 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
SNRNP40Q96DI7 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.74■□□□□ 0.91
SNRNP40Q96DI7 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNRNP40Q96DI7 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.74■□□□□ 0.91
SNRNP40Q96DI7 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SNRNP40Q96DI7 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SNRNP40Q96DI7 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SNRNP40Q96DI7 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.74■□□□□ 0.91
SNRNP40Q96DI7 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.74■□□□□ 0.91
SNRNP40Q96DI7 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.74■□□□□ 0.91
SNRNP40Q96DI7 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SNRNP40Q96DI7 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SNRNP40Q96DI7 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
SNRNP40Q96DI7 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.73■□□□□ 0.91
SNRNP40Q96DI7 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNRNP40Q96DI7 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNRNP40Q96DI7 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNRNP40Q96DI7 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.73■□□□□ 0.91
SNRNP40Q96DI7 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SNRNP40Q96DI7 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SNRNP40Q96DI7 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNRNP40Q96DI7 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SNRNP40Q96DI7 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
SNRNP40Q96DI7 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SNRNP40Q96DI7 AC136469.2-201ENST00000623944 1028 ntBASIC20.72■□□□□ 0.91
SNRNP40Q96DI7 AC241377.3-202ENST00000626088 1088 ntBASIC20.72■□□□□ 0.91
SNRNP40Q96DI7 AC241585.3-202ENST00000628937 1088 ntBASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms