Protein–RNA interactions for Protein: Q96BD0

SLCO4A1, Solute carrier organic anion transporter family member 4A1, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLCO4A1Q96BD0 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SLCO4A1Q96BD0 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.61■■□□□ 1.05
SLCO4A1Q96BD0 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SLCO4A1Q96BD0 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SLCO4A1Q96BD0 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
SLCO4A1Q96BD0 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.61■■□□□ 1.05
SLCO4A1Q96BD0 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
SLCO4A1Q96BD0 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLCO4A1Q96BD0 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.6■■□□□ 1.05
SLCO4A1Q96BD0 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SLCO4A1Q96BD0 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLCO4A1Q96BD0 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SLCO4A1Q96BD0 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SLCO4A1Q96BD0 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLCO4A1Q96BD0 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLCO4A1Q96BD0 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.6■■□□□ 1.05
SLCO4A1Q96BD0 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.6■■□□□ 1.05
SLCO4A1Q96BD0 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLCO4A1Q96BD0 AC137767.1-201ENST00000602918 1920 ntBASIC21.6■■□□□ 1.05
SLCO4A1Q96BD0 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.6■■□□□ 1.05
SLCO4A1Q96BD0 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SLCO4A1Q96BD0 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SLCO4A1Q96BD0 ECEL1P1-201ENST00000373592 1742 ntBASIC21.59■■□□□ 1.05
SLCO4A1Q96BD0 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SLCO4A1Q96BD0 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.59■■□□□ 1.05
SLCO4A1Q96BD0 AL157400.5-201ENST00000507624 621 ntBASIC21.59■■□□□ 1.05
SLCO4A1Q96BD0 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.59■■□□□ 1.05
SLCO4A1Q96BD0 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.59■■□□□ 1.05
SLCO4A1Q96BD0 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SLCO4A1Q96BD0 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SLCO4A1Q96BD0 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SLCO4A1Q96BD0 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SLCO4A1Q96BD0 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
SLCO4A1Q96BD0 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SLCO4A1Q96BD0 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
SLCO4A1Q96BD0 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SLCO4A1Q96BD0 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
SLCO4A1Q96BD0 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.58■■□□□ 1.05
SLCO4A1Q96BD0 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
SLCO4A1Q96BD0 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
SLCO4A1Q96BD0 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SLCO4A1Q96BD0 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.58■■□□□ 1.05
SLCO4A1Q96BD0 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
SLCO4A1Q96BD0 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
SLCO4A1Q96BD0 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
SLCO4A1Q96BD0 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SLCO4A1Q96BD0 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SLCO4A1Q96BD0 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SLCO4A1Q96BD0 AC127496.7-201ENST00000625110 1798 ntBASIC21.58■■□□□ 1.04
SLCO4A1Q96BD0 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SLCO4A1Q96BD0 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
SLCO4A1Q96BD0 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SLCO4A1Q96BD0 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLCO4A1Q96BD0 AC007375.3-201ENST00000600936 2314 ntBASIC21.57■■□□□ 1.04
SLCO4A1Q96BD0 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
SLCO4A1Q96BD0 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SLCO4A1Q96BD0 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.57■■□□□ 1.04
SLCO4A1Q96BD0 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLCO4A1Q96BD0 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLCO4A1Q96BD0 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLCO4A1Q96BD0 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
SLCO4A1Q96BD0 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.57■■□□□ 1.04
SLCO4A1Q96BD0 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SLCO4A1Q96BD0 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SLCO4A1Q96BD0 FOXO3B-201ENST00000395675 1928 ntBASIC21.57■■□□□ 1.04
SLCO4A1Q96BD0 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SLCO4A1Q96BD0 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.56■■□□□ 1.04
SLCO4A1Q96BD0 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SLCO4A1Q96BD0 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
SLCO4A1Q96BD0 MIR7108-201ENST00000614319 87 ntBASIC21.56■■□□□ 1.04
SLCO4A1Q96BD0 CR559946.2-201ENST00000623684 991 ntBASIC21.56■■□□□ 1.04
SLCO4A1Q96BD0 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SLCO4A1Q96BD0 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SLCO4A1Q96BD0 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
SLCO4A1Q96BD0 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
SLCO4A1Q96BD0 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLCO4A1Q96BD0 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLCO4A1Q96BD0 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLCO4A1Q96BD0 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLCO4A1Q96BD0 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLCO4A1Q96BD0 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLCO4A1Q96BD0 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.55■■□□□ 1.04
SLCO4A1Q96BD0 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLCO4A1Q96BD0 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SLCO4A1Q96BD0 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLCO4A1Q96BD0 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SLCO4A1Q96BD0 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SLCO4A1Q96BD0 MIR3648-2-201ENST00000581792 180 ntBASIC21.54■■□□□ 1.04
SLCO4A1Q96BD0 MIR3648-1-201ENST00000615959 180 ntBASIC21.54■■□□□ 1.04
SLCO4A1Q96BD0 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.54■■□□□ 1.04
SLCO4A1Q96BD0 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.54■■□□□ 1.04
SLCO4A1Q96BD0 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLCO4A1Q96BD0 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
SLCO4A1Q96BD0 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SLCO4A1Q96BD0 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SLCO4A1Q96BD0 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SLCO4A1Q96BD0 MIR3960-201ENST00000583311 91 ntBASIC21.53■■□□□ 1.04
SLCO4A1Q96BD0 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SLCO4A1Q96BD0 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SLCO4A1Q96BD0 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms