Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
PTCD2Q8WV60 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PTCD2Q8WV60 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PTCD2Q8WV60 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.26■■□□□ 1.31
PTCD2Q8WV60 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
PTCD2Q8WV60 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.26■■□□□ 1.31
PTCD2Q8WV60 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PTCD2Q8WV60 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
PTCD2Q8WV60 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.26■■□□□ 1.31
PTCD2Q8WV60 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
PTCD2Q8WV60 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.25■■□□□ 1.31
PTCD2Q8WV60 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PTCD2Q8WV60 GUSBP5-201ENST00000418136 578 ntBASIC23.25■■□□□ 1.31
PTCD2Q8WV60 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.25■■□□□ 1.31
PTCD2Q8WV60 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
PTCD2Q8WV60 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
PTCD2Q8WV60 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PTCD2Q8WV60 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
PTCD2Q8WV60 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PTCD2Q8WV60 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PTCD2Q8WV60 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PTCD2Q8WV60 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PTCD2Q8WV60 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
PTCD2Q8WV60 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PTCD2Q8WV60 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PTCD2Q8WV60 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
PTCD2Q8WV60 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.24■■□□□ 1.31
PTCD2Q8WV60 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.24■■□□□ 1.31
PTCD2Q8WV60 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.24■■□□□ 1.31
PTCD2Q8WV60 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PTCD2Q8WV60 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PTCD2Q8WV60 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.23■■□□□ 1.31
PTCD2Q8WV60 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
PTCD2Q8WV60 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PTCD2Q8WV60 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PTCD2Q8WV60 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
PTCD2Q8WV60 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PTCD2Q8WV60 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PTCD2Q8WV60 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.22■■□□□ 1.31
PTCD2Q8WV60 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.22■■□□□ 1.31
PTCD2Q8WV60 MIR4281-201ENST00000580852 62 ntBASIC23.22■■□□□ 1.31
PTCD2Q8WV60 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC23.22■■□□□ 1.31
PTCD2Q8WV60 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PTCD2Q8WV60 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
PTCD2Q8WV60 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PTCD2Q8WV60 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PTCD2Q8WV60 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.21■■□□□ 1.31
PTCD2Q8WV60 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC23.21■■□□□ 1.31
PTCD2Q8WV60 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PTCD2Q8WV60 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.21■■□□□ 1.31
PTCD2Q8WV60 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
PTCD2Q8WV60 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PTCD2Q8WV60 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PTCD2Q8WV60 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PTCD2Q8WV60 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
PTCD2Q8WV60 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC23.2■■□□□ 1.3
PTCD2Q8WV60 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PTCD2Q8WV60 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
PTCD2Q8WV60 ABCB10P4-201ENST00000566803 2184 ntBASIC23.2■■□□□ 1.3
PTCD2Q8WV60 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PTCD2Q8WV60 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PTCD2Q8WV60 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC23.19■■□□□ 1.3
PTCD2Q8WV60 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.19■■□□□ 1.3
PTCD2Q8WV60 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC23.19■■□□□ 1.3
PTCD2Q8WV60 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.19■■□□□ 1.3
PTCD2Q8WV60 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
PTCD2Q8WV60 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PTCD2Q8WV60 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PTCD2Q8WV60 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
PTCD2Q8WV60 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PTCD2Q8WV60 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PTCD2Q8WV60 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PTCD2Q8WV60 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PTCD2Q8WV60 GAK-223ENST00000628912 497 ntTSL 5 BASIC23.18■■□□□ 1.3
PTCD2Q8WV60 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PTCD2Q8WV60 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PTCD2Q8WV60 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PTCD2Q8WV60 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PTCD2Q8WV60 Z92544.1-202ENST00000571933 1220 ntBASIC23.17■■□□□ 1.3
PTCD2Q8WV60 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.17■■□□□ 1.3
PTCD2Q8WV60 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
PTCD2Q8WV60 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PTCD2Q8WV60 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PTCD2Q8WV60 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PTCD2Q8WV60 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PTCD2Q8WV60 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.16■■□□□ 1.3
PTCD2Q8WV60 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.16■■□□□ 1.3
PTCD2Q8WV60 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PTCD2Q8WV60 AC137630.3-201ENST00000607245 391 ntBASIC23.16■■□□□ 1.3
PTCD2Q8WV60 AL022069.1-201ENST00000568025 1636 ntBASIC23.15■■□□□ 1.3
PTCD2Q8WV60 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.15■■□□□ 1.3
PTCD2Q8WV60 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
PTCD2Q8WV60 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PTCD2Q8WV60 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
PTCD2Q8WV60 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
PTCD2Q8WV60 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PTCD2Q8WV60 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.14■■□□□ 1.3
PTCD2Q8WV60 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
PTCD2Q8WV60 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.14■■□□□ 1.29
PTCD2Q8WV60 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms