Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC29.59■■■□□ 2.33
LINC00116Q8NCU8 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC29.59■■■□□ 2.33
LINC00116Q8NCU8 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC29.59■■■□□ 2.33
LINC00116Q8NCU8 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC29.59■■■□□ 2.33
LINC00116Q8NCU8 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC29.59■■■□□ 2.33
LINC00116Q8NCU8 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC29.59■■■□□ 2.33
LINC00116Q8NCU8 SHF-206ENST00000560471 2499 ntTSL 5 BASIC29.59■■■□□ 2.33
LINC00116Q8NCU8 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
LINC00116Q8NCU8 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC29.58■■■□□ 2.33
LINC00116Q8NCU8 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC29.58■■■□□ 2.33
LINC00116Q8NCU8 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
LINC00116Q8NCU8 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
LINC00116Q8NCU8 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
LINC00116Q8NCU8 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
LINC00116Q8NCU8 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC29.57■■■□□ 2.32
LINC00116Q8NCU8 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC29.57■■■□□ 2.32
LINC00116Q8NCU8 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
LINC00116Q8NCU8 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
LINC00116Q8NCU8 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
LINC00116Q8NCU8 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC29.56■■■□□ 2.32
LINC00116Q8NCU8 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
LINC00116Q8NCU8 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC29.56■■■□□ 2.32
LINC00116Q8NCU8 AC010501.1-201ENST00000606270 1962 ntBASIC29.55■■■□□ 2.32
LINC00116Q8NCU8 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC29.55■■■□□ 2.32
LINC00116Q8NCU8 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
LINC00116Q8NCU8 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC29.55■■■□□ 2.32
LINC00116Q8NCU8 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC29.55■■■□□ 2.32
LINC00116Q8NCU8 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC29.55■■■□□ 2.32
LINC00116Q8NCU8 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
LINC00116Q8NCU8 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
LINC00116Q8NCU8 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC29.53■■■□□ 2.32
LINC00116Q8NCU8 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
LINC00116Q8NCU8 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
LINC00116Q8NCU8 AC006455.2-201ENST00000429931 906 ntBASIC29.53■■■□□ 2.32
LINC00116Q8NCU8 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC29.53■■■□□ 2.32
LINC00116Q8NCU8 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC29.53■■■□□ 2.32
LINC00116Q8NCU8 SP2-202ENST00000613139 908 ntTSL 5 BASIC29.53■■■□□ 2.32
LINC00116Q8NCU8 AC136469.2-201ENST00000623944 1028 ntBASIC29.53■■■□□ 2.32
LINC00116Q8NCU8 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
LINC00116Q8NCU8 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC29.52■■■□□ 2.32
LINC00116Q8NCU8 HES6-206ENST00000409574 738 ntTSL 2 BASIC29.52■■■□□ 2.32
LINC00116Q8NCU8 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC29.52■■■□□ 2.32
LINC00116Q8NCU8 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC29.52■■■□□ 2.32
LINC00116Q8NCU8 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
LINC00116Q8NCU8 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC29.51■■■□□ 2.32
LINC00116Q8NCU8 C17orf82-201ENST00000623772 1530 ntBASIC29.51■■■□□ 2.32
LINC00116Q8NCU8 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
LINC00116Q8NCU8 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC29.51■■■□□ 2.31
LINC00116Q8NCU8 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC29.51■■■□□ 2.31
LINC00116Q8NCU8 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC29.51■■■□□ 2.31
LINC00116Q8NCU8 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC29.51■■■□□ 2.31
LINC00116Q8NCU8 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC29.51■■■□□ 2.31
LINC00116Q8NCU8 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC29.51■■■□□ 2.31
LINC00116Q8NCU8 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC29.5■■■□□ 2.31
LINC00116Q8NCU8 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
LINC00116Q8NCU8 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
LINC00116Q8NCU8 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
LINC00116Q8NCU8 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
LINC00116Q8NCU8 IKBKGP1-201ENST00000612193 1073 ntBASIC29.5■■■□□ 2.31
LINC00116Q8NCU8 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC29.5■■■□□ 2.31
LINC00116Q8NCU8 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
LINC00116Q8NCU8 AC090192.1-201ENST00000517740 490 ntBASIC29.49■■■□□ 2.31
LINC00116Q8NCU8 RARRES2P11-201ENST00000635158 484 ntBASIC29.49■■■□□ 2.31
LINC00116Q8NCU8 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC29.49■■■□□ 2.31
LINC00116Q8NCU8 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC29.48■■■□□ 2.31
LINC00116Q8NCU8 PKM-203ENST00000389093 2279 ntTSL 5 BASIC29.48■■■□□ 2.31
LINC00116Q8NCU8 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC29.48■■■□□ 2.31
LINC00116Q8NCU8 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC29.48■■■□□ 2.31
LINC00116Q8NCU8 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
LINC00116Q8NCU8 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC29.48■■■□□ 2.31
LINC00116Q8NCU8 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
LINC00116Q8NCU8 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC29.48■■■□□ 2.31
LINC00116Q8NCU8 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
LINC00116Q8NCU8 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC29.48■■■□□ 2.31
LINC00116Q8NCU8 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
LINC00116Q8NCU8 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
LINC00116Q8NCU8 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC29.47■■■□□ 2.31
LINC00116Q8NCU8 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC29.47■■■□□ 2.31
LINC00116Q8NCU8 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC29.47■■■□□ 2.31
LINC00116Q8NCU8 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC29.46■■■□□ 2.31
LINC00116Q8NCU8 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC29.46■■■□□ 2.31
LINC00116Q8NCU8 HACD1-201ENST00000326961 773 ntTSL 2 BASIC29.46■■■□□ 2.31
LINC00116Q8NCU8 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
LINC00116Q8NCU8 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC29.46■■■□□ 2.31
LINC00116Q8NCU8 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC29.46■■■□□ 2.31
LINC00116Q8NCU8 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC29.45■■■□□ 2.31
LINC00116Q8NCU8 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC29.45■■■□□ 2.31
LINC00116Q8NCU8 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC29.45■■■□□ 2.31
LINC00116Q8NCU8 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
LINC00116Q8NCU8 AC233992.3-201ENST00000607491 485 ntBASIC29.45■■■□□ 2.31
LINC00116Q8NCU8 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC29.45■■■□□ 2.3
LINC00116Q8NCU8 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
LINC00116Q8NCU8 STK32C-205ENST00000456004 607 ntTSL 2 BASIC29.44■■■□□ 2.3
LINC00116Q8NCU8 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC29.44■■■□□ 2.3
LINC00116Q8NCU8 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC29.44■■■□□ 2.3
LINC00116Q8NCU8 AL031602.1-201ENST00000633169 911 ntBASIC29.44■■■□□ 2.3
LINC00116Q8NCU8 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
LINC00116Q8NCU8 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
LINC00116Q8NCU8 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC29.43■■■□□ 2.3
LINC00116Q8NCU8 ASB1-202ENST00000409297 878 ntTSL 5 BASIC29.43■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms