Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
XRN1Q8IZH2 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
XRN1Q8IZH2 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
XRN1Q8IZH2 KRT18P5-201ENST00000436075 1291 ntBASIC32.53■■■□□ 2.8
XRN1Q8IZH2 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC32.53■■■□□ 2.8
XRN1Q8IZH2 SP2-202ENST00000613139 908 ntTSL 5 BASIC32.53■■■□□ 2.8
XRN1Q8IZH2 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
XRN1Q8IZH2 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC32.52■■■□□ 2.8
XRN1Q8IZH2 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
XRN1Q8IZH2 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC32.52■■■□□ 2.8
XRN1Q8IZH2 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
XRN1Q8IZH2 AC009102.2-201ENST00000606772 1639 ntBASIC32.52■■■□□ 2.8
XRN1Q8IZH2 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC32.51■■■□□ 2.8
XRN1Q8IZH2 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC32.51■■■□□ 2.8
XRN1Q8IZH2 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
XRN1Q8IZH2 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
XRN1Q8IZH2 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC32.51■■■□□ 2.79
XRN1Q8IZH2 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC32.51■■■□□ 2.79
XRN1Q8IZH2 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
XRN1Q8IZH2 REST-206ENST00000612429 1376 ntTSL 5 BASIC32.5■■■□□ 2.79
XRN1Q8IZH2 REST-207ENST00000616975 1370 ntTSL 5 BASIC32.5■■■□□ 2.79
XRN1Q8IZH2 AC092437.1-201ENST00000624794 1048 ntBASIC32.5■■■□□ 2.79
XRN1Q8IZH2 AC010501.1-201ENST00000606270 1962 ntBASIC32.5■■■□□ 2.79
XRN1Q8IZH2 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC32.5■■■□□ 2.79
XRN1Q8IZH2 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC32.49■■■□□ 2.79
XRN1Q8IZH2 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
XRN1Q8IZH2 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC32.49■■■□□ 2.79
XRN1Q8IZH2 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC32.48■■■□□ 2.79
XRN1Q8IZH2 AC034268.1-201ENST00000441047 882 ntBASIC32.48■■■□□ 2.79
XRN1Q8IZH2 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
XRN1Q8IZH2 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC32.48■■■□□ 2.79
XRN1Q8IZH2 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC32.48■■■□□ 2.79
XRN1Q8IZH2 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
XRN1Q8IZH2 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
XRN1Q8IZH2 ASB1-202ENST00000409297 878 ntTSL 5 BASIC32.48■■■□□ 2.79
XRN1Q8IZH2 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC32.48■■■□□ 2.79
XRN1Q8IZH2 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC32.48■■■□□ 2.79
XRN1Q8IZH2 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
XRN1Q8IZH2 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC32.47■■■□□ 2.79
XRN1Q8IZH2 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC32.47■■■□□ 2.79
XRN1Q8IZH2 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
XRN1Q8IZH2 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
XRN1Q8IZH2 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC32.46■■■□□ 2.79
XRN1Q8IZH2 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC32.46■■■□□ 2.79
XRN1Q8IZH2 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
XRN1Q8IZH2 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC32.46■■■□□ 2.79
XRN1Q8IZH2 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
XRN1Q8IZH2 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
XRN1Q8IZH2 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC32.45■■■□□ 2.79
XRN1Q8IZH2 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC32.45■■■□□ 2.79
XRN1Q8IZH2 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
XRN1Q8IZH2 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC32.44■■■□□ 2.78
XRN1Q8IZH2 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC32.44■■■□□ 2.78
XRN1Q8IZH2 HES6-206ENST00000409574 738 ntTSL 2 BASIC32.44■■■□□ 2.78
XRN1Q8IZH2 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC32.44■■■□□ 2.78
XRN1Q8IZH2 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC32.44■■■□□ 2.78
XRN1Q8IZH2 MPST-208ENST00000628507 698 ntTSL 5 BASIC32.44■■■□□ 2.78
XRN1Q8IZH2 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
XRN1Q8IZH2 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC32.44■■■□□ 2.78
XRN1Q8IZH2 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
XRN1Q8IZH2 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC32.43■■■□□ 2.78
XRN1Q8IZH2 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
XRN1Q8IZH2 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC32.43■■■□□ 2.78
XRN1Q8IZH2 AK1-201ENST00000223836 736 ntTSL 3 BASIC32.43■■■□□ 2.78
XRN1Q8IZH2 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC32.43■■■□□ 2.78
XRN1Q8IZH2 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC32.42■■■□□ 2.78
XRN1Q8IZH2 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC32.42■■■□□ 2.78
XRN1Q8IZH2 BX842568.3-201ENST00000418104 571 ntBASIC32.42■■■□□ 2.78
XRN1Q8IZH2 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC32.42■■■□□ 2.78
XRN1Q8IZH2 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC32.42■■■□□ 2.78
XRN1Q8IZH2 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC32.42■■■□□ 2.78
XRN1Q8IZH2 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC32.42■■■□□ 2.78
XRN1Q8IZH2 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC32.41■■■□□ 2.78
XRN1Q8IZH2 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
XRN1Q8IZH2 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC32.41■■■□□ 2.78
XRN1Q8IZH2 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC32.41■■■□□ 2.78
XRN1Q8IZH2 DUX4L2-201ENST00000561772 1275 ntBASIC32.41■■■□□ 2.78
XRN1Q8IZH2 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC32.41■■■□□ 2.78
XRN1Q8IZH2 MIR6089-201ENST00000616698 64 ntBASIC32.41■■■□□ 2.78
XRN1Q8IZH2 DUX4L6-201ENST00000626483 1275 ntBASIC32.41■■■□□ 2.78
XRN1Q8IZH2 DUX4L1-201ENST00000627662 1275 ntBASIC32.41■■■□□ 2.78
XRN1Q8IZH2 DUX4L8-201ENST00000629013 1275 ntBASIC32.41■■■□□ 2.78
XRN1Q8IZH2 DUX4L3-201ENST00000630187 1275 ntBASIC32.41■■■□□ 2.78
XRN1Q8IZH2 DUX4L7-201ENST00000630678 1275 ntBASIC32.41■■■□□ 2.78
XRN1Q8IZH2 DUX4L5-201ENST00000630834 1275 ntBASIC32.41■■■□□ 2.78
XRN1Q8IZH2 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC32.41■■■□□ 2.78
XRN1Q8IZH2 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC32.41■■■□□ 2.78
XRN1Q8IZH2 AC027612.3-201ENST00000413684 1047 ntBASIC32.4■■■□□ 2.78
XRN1Q8IZH2 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC32.4■■■□□ 2.78
XRN1Q8IZH2 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC32.4■■■□□ 2.78
XRN1Q8IZH2 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC32.4■■■□□ 2.78
XRN1Q8IZH2 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
XRN1Q8IZH2 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
XRN1Q8IZH2 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC32.4■■■□□ 2.78
XRN1Q8IZH2 STK32C-205ENST00000456004 607 ntTSL 2 BASIC32.4■■■□□ 2.78
XRN1Q8IZH2 AC233992.3-201ENST00000607491 485 ntBASIC32.4■■■□□ 2.78
XRN1Q8IZH2 AC241377.3-202ENST00000626088 1088 ntBASIC32.4■■■□□ 2.78
XRN1Q8IZH2 AC241585.3-202ENST00000628937 1088 ntBASIC32.4■■■□□ 2.78
XRN1Q8IZH2 AC245100.8-202ENST00000629247 1058 ntBASIC32.4■■■□□ 2.78
XRN1Q8IZH2 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms