Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
KRTCAP3Q53RY4 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.7■□□□□ 0.9
KRTCAP3Q53RY4 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
KRTCAP3Q53RY4 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.69■□□□□ 0.9
KRTCAP3Q53RY4 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
KRTCAP3Q53RY4 MIR6089-201ENST00000616698 64 ntBASIC20.69■□□□□ 0.9
KRTCAP3Q53RY4 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.69■□□□□ 0.9
KRTCAP3Q53RY4 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KRTCAP3Q53RY4 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRTCAP3Q53RY4 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
KRTCAP3Q53RY4 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
KRTCAP3Q53RY4 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.68■□□□□ 0.9
KRTCAP3Q53RY4 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
KRTCAP3Q53RY4 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.68■□□□□ 0.9
KRTCAP3Q53RY4 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRTCAP3Q53RY4 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.68■□□□□ 0.9
KRTCAP3Q53RY4 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
KRTCAP3Q53RY4 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.68■□□□□ 0.9
KRTCAP3Q53RY4 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
KRTCAP3Q53RY4 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRTCAP3Q53RY4 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRTCAP3Q53RY4 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRTCAP3Q53RY4 AL136967.2-201ENST00000623968 743 ntBASIC20.67■□□□□ 0.9
KRTCAP3Q53RY4 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRTCAP3Q53RY4 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRTCAP3Q53RY4 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRTCAP3Q53RY4 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
KRTCAP3Q53RY4 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
KRTCAP3Q53RY4 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRTCAP3Q53RY4 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
KRTCAP3Q53RY4 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.66■□□□□ 0.9
KRTCAP3Q53RY4 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.66■□□□□ 0.9
KRTCAP3Q53RY4 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.66■□□□□ 0.9
KRTCAP3Q53RY4 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
KRTCAP3Q53RY4 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.66■□□□□ 0.9
KRTCAP3Q53RY4 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRTCAP3Q53RY4 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRTCAP3Q53RY4 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRTCAP3Q53RY4 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.65■□□□□ 0.9
KRTCAP3Q53RY4 DUSP8P4-201ENST00000399538 1761 ntBASIC20.65■□□□□ 0.9
KRTCAP3Q53RY4 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.65■□□□□ 0.9
KRTCAP3Q53RY4 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.65■□□□□ 0.9
KRTCAP3Q53RY4 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.65■□□□□ 0.9
KRTCAP3Q53RY4 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.65■□□□□ 0.9
KRTCAP3Q53RY4 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRTCAP3Q53RY4 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.65■□□□□ 0.9
KRTCAP3Q53RY4 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KRTCAP3Q53RY4 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.65■□□□□ 0.9
KRTCAP3Q53RY4 RARRES2P6-201ENST00000567333 442 ntBASIC20.65■□□□□ 0.9
KRTCAP3Q53RY4 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
KRTCAP3Q53RY4 AL138724.1-201ENST00000606771 1088 ntBASIC20.65■□□□□ 0.9
KRTCAP3Q53RY4 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.64■□□□□ 0.9
KRTCAP3Q53RY4 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
KRTCAP3Q53RY4 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
KRTCAP3Q53RY4 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRTCAP3Q53RY4 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRTCAP3Q53RY4 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRTCAP3Q53RY4 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
KRTCAP3Q53RY4 MIR939-201ENST00000401314 82 ntBASIC20.64■□□□□ 0.89
KRTCAP3Q53RY4 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
KRTCAP3Q53RY4 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.64■□□□□ 0.89
KRTCAP3Q53RY4 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
KRTCAP3Q53RY4 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
KRTCAP3Q53RY4 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
KRTCAP3Q53RY4 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRTCAP3Q53RY4 AC091305.1-201ENST00000479476 895 ntBASIC20.63■□□□□ 0.89
KRTCAP3Q53RY4 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.63■□□□□ 0.89
KRTCAP3Q53RY4 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.63■□□□□ 0.89
KRTCAP3Q53RY4 AF213884.3-201ENST00000563833 479 ntBASIC20.63■□□□□ 0.89
KRTCAP3Q53RY4 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.63■□□□□ 0.89
KRTCAP3Q53RY4 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
KRTCAP3Q53RY4 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.63■□□□□ 0.89
KRTCAP3Q53RY4 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRTCAP3Q53RY4 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRTCAP3Q53RY4 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
KRTCAP3Q53RY4 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
KRTCAP3Q53RY4 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
KRTCAP3Q53RY4 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRTCAP3Q53RY4 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.62■□□□□ 0.89
KRTCAP3Q53RY4 AC241377.3-202ENST00000626088 1088 ntBASIC20.62■□□□□ 0.89
KRTCAP3Q53RY4 AC241585.3-202ENST00000628937 1088 ntBASIC20.62■□□□□ 0.89
KRTCAP3Q53RY4 AC245100.8-202ENST00000629247 1058 ntBASIC20.62■□□□□ 0.89
KRTCAP3Q53RY4 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.61■□□□□ 0.89
KRTCAP3Q53RY4 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRTCAP3Q53RY4 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.61■□□□□ 0.89
KRTCAP3Q53RY4 AC105265.2-201ENST00000467189 838 ntBASIC20.61■□□□□ 0.89
KRTCAP3Q53RY4 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.61■□□□□ 0.89
KRTCAP3Q53RY4 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
KRTCAP3Q53RY4 AC099791.2-201ENST00000605725 427 ntBASIC20.61■□□□□ 0.89
KRTCAP3Q53RY4 AC011298.3-201ENST00000615796 283 ntBASIC20.61■□□□□ 0.89
KRTCAP3Q53RY4 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.61■□□□□ 0.89
KRTCAP3Q53RY4 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRTCAP3Q53RY4 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRTCAP3Q53RY4 AL161729.1-201ENST00000604104 1402 ntBASIC20.61■□□□□ 0.89
KRTCAP3Q53RY4 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
KRTCAP3Q53RY4 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.6■□□□□ 0.89
KRTCAP3Q53RY4 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.6■□□□□ 0.89
KRTCAP3Q53RY4 AC009102.2-201ENST00000606772 1639 ntBASIC20.6■□□□□ 0.89
KRTCAP3Q53RY4 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
KRTCAP3Q53RY4 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms