Protein–RNA interactions for Protein: Q04673

SSL1, General transcription and DNA repair factor IIH subunit SSL1, yeastyeast

Predicted RBP Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL1Q04673 MRP51YPL118W 1035 nt5.79□□□□□ -1.48
SSL1Q04673 MCM3YEL032W 2916 nt5.79□□□□□ -1.48
SSL1Q04673 IMA5YJL216C 1746 nt5.79□□□□□ -1.48
SSL1Q04673 URA7YBL039C 1740 nt5.79□□□□□ -1.48
SSL1Q04673 KSS1YGR040W 1107 nt5.78□□□□□ -1.48
SSL1Q04673 YHR137C-AYHR137C-A 651 nt5.78□□□□□ -1.48
SSL1Q04673 DID4YKL002W 699 nt5.78□□□□□ -1.48
SSL1Q04673 YML012C-AYML012C-A 378 nt5.78□□□□□ -1.48
SSL1Q04673 PGA2YNL149C 390 nt5.78□□□□□ -1.48
SSL1Q04673 TLG2YOL018C 1194 nt5.78□□□□□ -1.48
SSL1Q04673 UGO1YDR470C 1509 nt5.78□□□□□ -1.48
SSL1Q04673 MRE11YMR224C 2079 nt5.78□□□□□ -1.48
SSL1Q04673 LSG1YGL099W 1923 nt5.78□□□□□ -1.48
SSL1Q04673 SUP19tS(UGA)E 82 nt5.77□□□□□ -1.49
SSL1Q04673 SUP17tS(UGA)I 82 nt5.77□□□□□ -1.49
SSL1Q04673 SUP16tS(UGA)P 82 nt5.77□□□□□ -1.49
SSL1Q04673 YIR021W-AYIR021W-A 213 nt5.77□□□□□ -1.49
SSL1Q04673 MTR2YKL186C 555 nt5.77□□□□□ -1.49
SSL1Q04673 YAL066WYAL066W 309 nt5.77□□□□□ -1.49
SSL1Q04673 YIM2YMR151W 438 nt5.77□□□□□ -1.49
SSL1Q04673 UBC11YOR339C 471 nt5.77□□□□□ -1.49
SSL1Q04673 ECM8YBR076W 1065 nt5.77□□□□□ -1.49
SSL1Q04673 RPN7YPR108W 1290 nt5.77□□□□□ -1.49
SSL1Q04673 ERC1YHR032W 1746 nt5.77□□□□□ -1.49
SSL1Q04673 RAD3YER171W 2337 nt5.76□□□□□ -1.49
SSL1Q04673 COQ6YGR255C 1440 nt5.76□□□□□ -1.49
SSL1Q04673 PTC1YDL006W 846 nt5.76□□□□□ -1.49
SSL1Q04673 YDL022C-AYDL022C-A 249 nt5.76□□□□□ -1.49
SSL1Q04673 PRR2YDL214C 2100 nt5.76□□□□□ -1.49
SSL1Q04673 ERG25YGR060W 930 nt5.76□□□□□ -1.49
SSL1Q04673 YHR095WYHR095W 495 nt5.76□□□□□ -1.49
SSL1Q04673 YIL089WYIL089W 618 nt5.76□□□□□ -1.49
SSL1Q04673 YLR126CYLR126C 756 nt5.76□□□□□ -1.49
SSL1Q04673 MAC1YMR021C 1254 nt5.76□□□□□ -1.49
SSL1Q04673 SNO1YMR095C 675 nt5.76□□□□□ -1.49
SSL1Q04673 TOM40YMR203W 1164 nt5.76□□□□□ -1.49
SSL1Q04673 MLF3YNL074C 1359 nt5.76□□□□□ -1.49
SSL1Q04673 IML2YJL082W 2196 nt5.76□□□□□ -1.49
SSL1Q04673 KTR5YNL029C 1569 nt5.76□□□□□ -1.49
SSL1Q04673 UGX2YDL169C 672 nt5.75□□□□□ -1.49
SSL1Q04673 IPI1YHR085W 1005 nt5.75□□□□□ -1.49
SSL1Q04673 ERG20YJL167W 1059 nt5.75□□□□□ -1.49
SSL1Q04673 COX17YLL009C 210 nt5.75□□□□□ -1.49
SSL1Q04673 UIP3YAR027W 708 nt5.75□□□□□ -1.49
SSL1Q04673 ATG16YMR159C 453 nt5.75□□□□□ -1.49
SSL1Q04673 YOR097CYOR097C 528 nt5.75□□□□□ -1.49
SSL1Q04673 XBP1YIL101C 1944 nt5.75□□□□□ -1.49
SSL1Q04673 KCH1YJR054W 1494 nt5.75□□□□□ -1.49
SSL1Q04673 PRD1YCL057W 2139 nt5.75□□□□□ -1.49
SSL1Q04673 CLP1YOR250C 1338 nt5.74□□□□□ -1.49
SSL1Q04673 ATR1YML116W 1629 nt5.74□□□□□ -1.49
SSL1Q04673 YKR015CYKR015C 1707 nt5.74□□□□□ -1.49
SSL1Q04673 COX9YDL067C 180 nt5.74□□□□□ -1.49
SSL1Q04673 DFM1YDR411C 1026 nt5.74□□□□□ -1.49
SSL1Q04673 HPM1YIL110W 1134 nt5.74□□□□□ -1.49
SSL1Q04673 RPE1YJL121C 717 nt5.74□□□□□ -1.49
SSL1Q04673 EBP2YKL172W 1284 nt5.74□□□□□ -1.49
SSL1Q04673 GMH1YKR030W 822 nt5.74□□□□□ -1.49
SSL1Q04673 YNL217WYNL217W 981 nt5.74□□□□□ -1.49
SSL1Q04673 YAP7YOL028C 738 nt5.74□□□□□ -1.49
SSL1Q04673 YPL191CYPL191C 1083 nt5.74□□□□□ -1.49
SSL1Q04673 ATG12YBR217W 561 nt5.74□□□□□ -1.49
SSL1Q04673 MKC7YDR144C 1791 nt5.74□□□□□ -1.49
SSL1Q04673 NOP2YNL061W 1857 nt5.74□□□□□ -1.49
SSL1Q04673 FAA4YMR246W 2085 nt5.74□□□□□ -1.49
SSL1Q04673 FLC3YGL139W 2409 nt5.74□□□□□ -1.49
SSL1Q04673 YDR109CYDR109C 2148 nt5.74□□□□□ -1.49
SSL1Q04673 APE3YBR286W 1614 nt5.74□□□□□ -1.49
SSL1Q04673 DRN1YGR093W 1524 nt5.74□□□□□ -1.49
SSL1Q04673 AAP1YHR047C 2571 nt5.73□□□□□ -1.49
SSL1Q04673 LCB2YDR062W 1686 nt5.73□□□□□ -1.49
SSL1Q04673 RNR3YIL066C 2610 nt5.73□□□□□ -1.49
SSL1Q04673 YLH47YPR125W 1365 nt5.73□□□□□ -1.49
SSL1Q04673 HAP2YGL237C 798 nt5.73□□□□□ -1.49
SSL1Q04673 SPO7YAL009W 780 nt5.73□□□□□ -1.49
SSL1Q04673 YJU3YKL094W 942 nt5.73□□□□□ -1.49
SSL1Q04673 ECM1YAL059W 639 nt5.73□□□□□ -1.49
SSL1Q04673 YML6YML025C 861 nt5.73□□□□□ -1.49
SSL1Q04673 CSM3YMR048W 954 nt5.73□□□□□ -1.49
SSL1Q04673 SMA1YPL027W 738 nt5.73□□□□□ -1.49
SSL1Q04673 ARL3YPL051W 597 nt5.73□□□□□ -1.49
SSL1Q04673 YBR144CYBR144C 315 nt5.73□□□□□ -1.49
SSL1Q04673 STL1YDR536W 1710 nt5.73□□□□□ -1.49
SSL1Q04673 YDR034C-CYDR034C-C 1317 nt5.73□□□□□ -1.49
SSL1Q04673 YLR410W-AYLR410W-A 1317 nt5.73□□□□□ -1.49
SSL1Q04673 ISN1YOR155C 1353 nt5.72□□□□□ -1.49
SSL1Q04673 YCR100CYCR100C 951 nt5.72□□□□□ -1.49
SSL1Q04673 KRE28YDR532C 1158 nt5.72□□□□□ -1.49
SSL1Q04673 RME1YGR044C 903 nt5.72□□□□□ -1.49
SSL1Q04673 DJP1YIR004W 1299 nt5.72□□□□□ -1.49
SSL1Q04673 GEP5YLR091W 882 nt5.72□□□□□ -1.49
SSL1Q04673 YLR363W-AYLR363W-A 258 nt5.72□□□□□ -1.49
SSL1Q04673 REX4YOL080C 870 nt5.72□□□□□ -1.49
SSL1Q04673 snR19snR19 568 nt5.72□□□□□ -1.49
SSL1Q04673 PDB1YBR221C 1101 nt5.72□□□□□ -1.49
SSL1Q04673 HOS1YPR068C 1413 nt5.72□□□□□ -1.49
SSL1Q04673 FOB1YDR110W 1701 nt5.71□□□□□ -1.49
SSL1Q04673 HSE1YHL002W 1359 nt5.71□□□□□ -1.5
SSL1Q04673 ALT1YLR089C 1779 nt5.71□□□□□ -1.5
SSL1Q04673 DBP9YLR276C 1785 nt5.71□□□□□ -1.5
Retrieved 100 of 7,029 protein–RNA pairs in 71 ms