Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC33.42■■■□□ 2.94
CLTCL1P53675 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
CLTCL1P53675 CEBPA-AS1-201ENST00000592982 2198 ntBASIC33.42■■■□□ 2.94
CLTCL1P53675 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC33.42■■■□□ 2.94
CLTCL1P53675 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC33.42■■■□□ 2.94
CLTCL1P53675 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
CLTCL1P53675 EDA-201ENST00000338901 1233 ntBASIC33.41■■■□□ 2.94
CLTCL1P53675 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC33.41■■■□□ 2.94
CLTCL1P53675 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC33.41■■■□□ 2.94
CLTCL1P53675 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC33.41■■■□□ 2.94
CLTCL1P53675 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC33.41■■■□□ 2.94
CLTCL1P53675 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
CLTCL1P53675 STK32C-205ENST00000456004 607 ntTSL 2 BASIC33.4■■■□□ 2.94
CLTCL1P53675 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC33.4■■■□□ 2.94
CLTCL1P53675 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
CLTCL1P53675 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC33.39■■■□□ 2.94
CLTCL1P53675 MIR939-201ENST00000401314 82 ntBASIC33.39■■■□□ 2.94
CLTCL1P53675 PTMA-205ENST00000410064 814 ntTSL 2 BASIC33.39■■■□□ 2.94
CLTCL1P53675 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
CLTCL1P53675 AF213884.3-201ENST00000563833 479 ntBASIC33.39■■■□□ 2.94
CLTCL1P53675 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC33.39■■■□□ 2.94
CLTCL1P53675 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC33.39■■■□□ 2.94
CLTCL1P53675 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC33.39■■■□□ 2.94
CLTCL1P53675 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
CLTCL1P53675 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.93
CLTCL1P53675 AC026271.2-201ENST00000428091 497 ntBASIC33.39■■■□□ 2.93
CLTCL1P53675 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
CLTCL1P53675 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
CLTCL1P53675 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC33.38■■■□□ 2.93
CLTCL1P53675 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
CLTCL1P53675 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC33.38■■■□□ 2.93
CLTCL1P53675 PTCHD3P2-201ENST00000424937 1205 ntBASIC33.38■■■□□ 2.93
CLTCL1P53675 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
CLTCL1P53675 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC33.37■■■□□ 2.93
CLTCL1P53675 CD37-213ENST00000598095 1598 ntTSL 2 BASIC33.37■■■□□ 2.93
CLTCL1P53675 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC33.37■■■□□ 2.93
CLTCL1P53675 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC33.37■■■□□ 2.93
CLTCL1P53675 LGR4-203ENST00000480977 492 ntTSL 2 BASIC33.37■■■□□ 2.93
CLTCL1P53675 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC33.37■■■□□ 2.93
CLTCL1P53675 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC33.37■■■□□ 2.93
CLTCL1P53675 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC33.36■■■□□ 2.93
CLTCL1P53675 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC33.36■■■□□ 2.93
CLTCL1P53675 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC33.36■■■□□ 2.93
CLTCL1P53675 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC33.36■■■□□ 2.93
CLTCL1P53675 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC33.36■■■□□ 2.93
CLTCL1P53675 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC33.36■■■□□ 2.93
CLTCL1P53675 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC33.36■■■□□ 2.93
CLTCL1P53675 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC33.36■■■□□ 2.93
CLTCL1P53675 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC33.36■■■□□ 2.93
CLTCL1P53675 REST-206ENST00000612429 1376 ntTSL 5 BASIC33.36■■■□□ 2.93
CLTCL1P53675 REST-207ENST00000616975 1370 ntTSL 5 BASIC33.36■■■□□ 2.93
CLTCL1P53675 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC33.36■■■□□ 2.93
CLTCL1P53675 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC33.36■■■□□ 2.93
CLTCL1P53675 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC33.36■■■□□ 2.93
CLTCL1P53675 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
CLTCL1P53675 AC105265.2-201ENST00000467189 838 ntBASIC33.35■■■□□ 2.93
CLTCL1P53675 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC33.35■■■□□ 2.93
CLTCL1P53675 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC33.35■■■□□ 2.93
CLTCL1P53675 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC33.35■■■□□ 2.93
CLTCL1P53675 LSR-205ENST00000427250 1606 ntTSL 2 BASIC33.35■■■□□ 2.93
CLTCL1P53675 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC33.35■■■□□ 2.93
CLTCL1P53675 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
CLTCL1P53675 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC33.34■■■□□ 2.93
CLTCL1P53675 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC33.34■■■□□ 2.93
CLTCL1P53675 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC33.34■■■□□ 2.93
CLTCL1P53675 GRAMD4P4-201ENST00000613563 1115 ntBASIC33.34■■■□□ 2.93
CLTCL1P53675 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC33.34■■■□□ 2.93
CLTCL1P53675 C17orf82-201ENST00000623772 1530 ntBASIC33.34■■■□□ 2.93
CLTCL1P53675 AC145676.1-201ENST00000514988 2004 ntBASIC33.34■■■□□ 2.93
CLTCL1P53675 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC33.33■■■□□ 2.93
CLTCL1P53675 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC33.33■■■□□ 2.93
CLTCL1P53675 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC33.33■■■□□ 2.93
CLTCL1P53675 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC33.33■■■□□ 2.93
CLTCL1P53675 SERBP1P1-201ENST00000396021 1160 ntBASIC33.33■■■□□ 2.93
CLTCL1P53675 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC33.33■■■□□ 2.93
CLTCL1P53675 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC33.33■■■□□ 2.93
CLTCL1P53675 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC33.33■■■□□ 2.93
CLTCL1P53675 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC33.33■■■□□ 2.93
CLTCL1P53675 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC33.32■■■□□ 2.92
CLTCL1P53675 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC33.32■■■□□ 2.92
CLTCL1P53675 MIR4767-201ENST00000582827 78 ntBASIC33.32■■■□□ 2.92
CLTCL1P53675 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC33.32■■■□□ 2.92
CLTCL1P53675 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC33.31■■■□□ 2.92
CLTCL1P53675 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC33.31■■■□□ 2.92
CLTCL1P53675 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
CLTCL1P53675 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC33.31■■■□□ 2.92
CLTCL1P53675 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC33.3■■■□□ 2.92
CLTCL1P53675 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC33.3■■■□□ 2.92
CLTCL1P53675 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC33.3■■■□□ 2.92
CLTCL1P53675 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
CLTCL1P53675 AC009102.2-201ENST00000606772 1639 ntBASIC33.29■■■□□ 2.92
CLTCL1P53675 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC33.29■■■□□ 2.92
CLTCL1P53675 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC33.29■■■□□ 2.92
CLTCL1P53675 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC33.29■■■□□ 2.92
CLTCL1P53675 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC33.29■■■□□ 2.92
CLTCL1P53675 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
CLTCL1P53675 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC33.29■■■□□ 2.92
CLTCL1P53675 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
CLTCL1P53675 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
CLTCL1P53675 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC33.28■■■□□ 2.92
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms