Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
SLC6A4P31645 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.76■■□□□ 1.39
SLC6A4P31645 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SLC6A4P31645 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SLC6A4P31645 AL022069.1-201ENST00000568025 1636 ntBASIC23.75■■□□□ 1.39
SLC6A4P31645 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.75■■□□□ 1.39
SLC6A4P31645 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SLC6A4P31645 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SLC6A4P31645 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
SLC6A4P31645 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SLC6A4P31645 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
SLC6A4P31645 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SLC6A4P31645 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SLC6A4P31645 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SLC6A4P31645 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.74■■□□□ 1.39
SLC6A4P31645 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.74■■□□□ 1.39
SLC6A4P31645 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SLC6A4P31645 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.74■■□□□ 1.39
SLC6A4P31645 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.73■■□□□ 1.39
SLC6A4P31645 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.73■■□□□ 1.39
SLC6A4P31645 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SLC6A4P31645 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SLC6A4P31645 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.73■■□□□ 1.39
SLC6A4P31645 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
SLC6A4P31645 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.73■■□□□ 1.39
SLC6A4P31645 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.73■■□□□ 1.39
SLC6A4P31645 MIR3621-201ENST00000580529 85 ntBASIC23.73■■□□□ 1.39
SLC6A4P31645 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SLC6A4P31645 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.73■■□□□ 1.39
SLC6A4P31645 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
SLC6A4P31645 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
SLC6A4P31645 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.72■■□□□ 1.39
SLC6A4P31645 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.72■■□□□ 1.39
SLC6A4P31645 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
SLC6A4P31645 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
SLC6A4P31645 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.72■■□□□ 1.39
SLC6A4P31645 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SLC6A4P31645 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SLC6A4P31645 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SLC6A4P31645 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
SLC6A4P31645 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
SLC6A4P31645 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.71■■□□□ 1.39
SLC6A4P31645 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.71■■□□□ 1.39
SLC6A4P31645 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SLC6A4P31645 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.71■■□□□ 1.39
SLC6A4P31645 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
SLC6A4P31645 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.7■■□□□ 1.39
SLC6A4P31645 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.7■■□□□ 1.38
SLC6A4P31645 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.7■■□□□ 1.38
SLC6A4P31645 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.7■■□□□ 1.38
SLC6A4P31645 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.7■■□□□ 1.38
SLC6A4P31645 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
SLC6A4P31645 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SLC6A4P31645 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SLC6A4P31645 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
SLC6A4P31645 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SLC6A4P31645 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
SLC6A4P31645 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SLC6A4P31645 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SLC6A4P31645 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
SLC6A4P31645 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.68■■□□□ 1.38
SLC6A4P31645 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.68■■□□□ 1.38
SLC6A4P31645 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.68■■□□□ 1.38
SLC6A4P31645 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.68■■□□□ 1.38
SLC6A4P31645 AC131281.2-201ENST00000520478 145 ntBASIC23.68■■□□□ 1.38
SLC6A4P31645 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.68■■□□□ 1.38
SLC6A4P31645 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SLC6A4P31645 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SLC6A4P31645 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SLC6A4P31645 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SLC6A4P31645 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.67■■□□□ 1.38
SLC6A4P31645 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.67■■□□□ 1.38
SLC6A4P31645 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.67■■□□□ 1.38
SLC6A4P31645 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.67■■□□□ 1.38
SLC6A4P31645 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.67■■□□□ 1.38
SLC6A4P31645 AL356740.2-201ENST00000601559 647 ntBASIC23.67■■□□□ 1.38
SLC6A4P31645 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.67■■□□□ 1.38
SLC6A4P31645 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
SLC6A4P31645 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SLC6A4P31645 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.66■■□□□ 1.38
SLC6A4P31645 QDPR-206ENST00000508623 601 ntTSL 3 BASIC23.66■■□□□ 1.38
SLC6A4P31645 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.66■■□□□ 1.38
SLC6A4P31645 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SLC6A4P31645 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
SLC6A4P31645 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SLC6A4P31645 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.65■■□□□ 1.38
SLC6A4P31645 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
SLC6A4P31645 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.65■■□□□ 1.38
SLC6A4P31645 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SLC6A4P31645 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.65■■□□□ 1.38
SLC6A4P31645 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC23.65■■□□□ 1.38
SLC6A4P31645 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.65■■□□□ 1.38
SLC6A4P31645 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SLC6A4P31645 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.65■■□□□ 1.38
SLC6A4P31645 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.65■■□□□ 1.38
SLC6A4P31645 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SLC6A4P31645 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.64■■□□□ 1.38
SLC6A4P31645 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SLC6A4P31645 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.37
SLC6A4P31645 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC23.64■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms