Protein–RNA interactions for Protein: P04155

TFF1, Trefoil factor 1, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1P04155 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TFF1P04155 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.31■□□□□ 0.68
TFF1P04155 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TFF1P04155 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.31■□□□□ 0.68
TFF1P04155 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.31■□□□□ 0.68
TFF1P04155 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.31■□□□□ 0.68
TFF1P04155 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TFF1P04155 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.31■□□□□ 0.68
TFF1P04155 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TFF1P04155 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TFF1P04155 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TFF1P04155 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.3■□□□□ 0.68
TFF1P04155 AC009299.2-201ENST00000482477 511 ntBASIC19.3■□□□□ 0.68
TFF1P04155 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.3■□□□□ 0.68
TFF1P04155 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TFF1P04155 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
TFF1P04155 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TFF1P04155 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TFF1P04155 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TFF1P04155 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TFF1P04155 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.29■□□□□ 0.68
TFF1P04155 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TFF1P04155 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
TFF1P04155 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
TFF1P04155 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.29■□□□□ 0.68
TFF1P04155 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.29■□□□□ 0.68
TFF1P04155 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.29■□□□□ 0.68
TFF1P04155 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
TFF1P04155 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TFF1P04155 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TFF1P04155 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TFF1P04155 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TFF1P04155 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TFF1P04155 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.28■□□□□ 0.68
TFF1P04155 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TFF1P04155 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TFF1P04155 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TFF1P04155 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TFF1P04155 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.27■□□□□ 0.68
TFF1P04155 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.27■□□□□ 0.68
TFF1P04155 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TFF1P04155 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TFF1P04155 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
TFF1P04155 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.27■□□□□ 0.68
TFF1P04155 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.27■□□□□ 0.68
TFF1P04155 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
TFF1P04155 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TFF1P04155 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
TFF1P04155 AC141586.4-201ENST00000624558 1573 ntBASIC19.27■□□□□ 0.67
TFF1P04155 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TFF1P04155 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TFF1P04155 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TFF1P04155 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TFF1P04155 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.26■□□□□ 0.67
TFF1P04155 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.26■□□□□ 0.67
TFF1P04155 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TFF1P04155 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TFF1P04155 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TFF1P04155 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TFF1P04155 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.26■□□□□ 0.67
TFF1P04155 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TFF1P04155 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.26■□□□□ 0.67
TFF1P04155 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TFF1P04155 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TFF1P04155 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.25■□□□□ 0.67
TFF1P04155 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TFF1P04155 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TFF1P04155 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.25■□□□□ 0.67
TFF1P04155 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TFF1P04155 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.25■□□□□ 0.67
TFF1P04155 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TFF1P04155 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TFF1P04155 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TFF1P04155 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TFF1P04155 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TFF1P04155 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.24■□□□□ 0.67
TFF1P04155 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TFF1P04155 AC239859.2-201ENST00000444165 318 ntBASIC19.24■□□□□ 0.67
TFF1P04155 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
TFF1P04155 AC137630.3-201ENST00000607245 391 ntBASIC19.24■□□□□ 0.67
TFF1P04155 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TFF1P04155 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
TFF1P04155 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TFF1P04155 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TFF1P04155 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TFF1P04155 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TFF1P04155 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TFF1P04155 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
TFF1P04155 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TFF1P04155 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
TFF1P04155 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.23■□□□□ 0.67
TFF1P04155 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.23■□□□□ 0.67
TFF1P04155 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.23■□□□□ 0.67
TFF1P04155 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.23■□□□□ 0.67
TFF1P04155 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TFF1P04155 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
TFF1P04155 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TFF1P04155 AL022069.1-201ENST00000568025 1636 ntBASIC19.22■□□□□ 0.67
TFF1P04155 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TFF1P04155 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms