Protein–RNA interactions for Protein: O95238

SPDEF, SAM pointed domain-containing Ets transcription factor, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEFO95238 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPDEFO95238 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPDEFO95238 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.37■□□□□ 0.69
SPDEFO95238 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPDEFO95238 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPDEFO95238 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.37■□□□□ 0.69
SPDEFO95238 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPDEFO95238 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.37■□□□□ 0.69
SPDEFO95238 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPDEFO95238 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPDEFO95238 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SPDEFO95238 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPDEFO95238 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SPDEFO95238 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
SPDEFO95238 AC004812.2-201ENST00000611079 2094 ntBASIC19.36■□□□□ 0.69
SPDEFO95238 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SPDEFO95238 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SPDEFO95238 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPDEFO95238 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPDEFO95238 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.36■□□□□ 0.69
SPDEFO95238 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.36■□□□□ 0.69
SPDEFO95238 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.36■□□□□ 0.69
SPDEFO95238 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.36■□□□□ 0.69
SPDEFO95238 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SPDEFO95238 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.36■□□□□ 0.69
SPDEFO95238 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPDEFO95238 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPDEFO95238 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPDEFO95238 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPDEFO95238 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPDEFO95238 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.35■□□□□ 0.69
SPDEFO95238 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC19.35■□□□□ 0.69
SPDEFO95238 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.35■□□□□ 0.69
SPDEFO95238 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPDEFO95238 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.35■□□□□ 0.69
SPDEFO95238 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPDEFO95238 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SPDEFO95238 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SPDEFO95238 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPDEFO95238 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPDEFO95238 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPDEFO95238 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPDEFO95238 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPDEFO95238 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SPDEFO95238 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.34■□□□□ 0.69
SPDEFO95238 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
SPDEFO95238 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SPDEFO95238 GPX1-201ENST00000419349 1106 ntBASIC19.34■□□□□ 0.69
SPDEFO95238 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.34■□□□□ 0.69
SPDEFO95238 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SPDEFO95238 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.34■□□□□ 0.69
SPDEFO95238 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPDEFO95238 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SPDEFO95238 C1orf229-201ENST00000623686 2258 ntBASIC19.34■□□□□ 0.69
SPDEFO95238 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
SPDEFO95238 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
SPDEFO95238 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SPDEFO95238 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SPDEFO95238 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.33■□□□□ 0.69
SPDEFO95238 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SPDEFO95238 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SPDEFO95238 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SPDEFO95238 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.33■□□□□ 0.68
SPDEFO95238 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.33■□□□□ 0.68
SPDEFO95238 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
SPDEFO95238 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SPDEFO95238 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPDEFO95238 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPDEFO95238 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPDEFO95238 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPDEFO95238 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPDEFO95238 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPDEFO95238 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPDEFO95238 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPDEFO95238 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPDEFO95238 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPDEFO95238 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SPDEFO95238 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPDEFO95238 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
SPDEFO95238 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.31■□□□□ 0.68
SPDEFO95238 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SPDEFO95238 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SPDEFO95238 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SPDEFO95238 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SPDEFO95238 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SPDEFO95238 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SPDEFO95238 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SPDEFO95238 RP9P-202ENST00000450133 1212 ntBASIC19.31■□□□□ 0.68
SPDEFO95238 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.31■□□□□ 0.68
SPDEFO95238 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.31■□□□□ 0.68
SPDEFO95238 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SPDEFO95238 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SPDEFO95238 SLC25A24-204ENST00000569674 2357 ntBASIC19.3■□□□□ 0.68
SPDEFO95238 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SPDEFO95238 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SPDEFO95238 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SPDEFO95238 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SPDEFO95238 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SPDEFO95238 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SPDEFO95238 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms