Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
BEST1O76090 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
BEST1O76090 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
BEST1O76090 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC24.3■■□□□ 1.48
BEST1O76090 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
BEST1O76090 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
BEST1O76090 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
BEST1O76090 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC24.29■■□□□ 1.48
BEST1O76090 AL022069.1-201ENST00000568025 1636 ntBASIC24.29■■□□□ 1.48
BEST1O76090 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC24.29■■□□□ 1.48
BEST1O76090 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
BEST1O76090 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
BEST1O76090 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC24.29■■□□□ 1.48
BEST1O76090 LSM7-203ENST00000585409 512 ntTSL 2 BASIC24.29■■□□□ 1.48
BEST1O76090 MIR6722-201ENST00000617286 78 ntBASIC24.29■■□□□ 1.48
BEST1O76090 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
BEST1O76090 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
BEST1O76090 EED-207ENST00000528180 1745 ntTSL 5 BASIC24.29■■□□□ 1.48
BEST1O76090 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
BEST1O76090 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC24.29■■□□□ 1.48
BEST1O76090 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC24.29■■□□□ 1.48
BEST1O76090 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
BEST1O76090 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC24.28■■□□□ 1.48
BEST1O76090 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
BEST1O76090 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC24.28■■□□□ 1.48
BEST1O76090 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
BEST1O76090 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
BEST1O76090 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC24.28■■□□□ 1.48
BEST1O76090 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC24.28■■□□□ 1.48
BEST1O76090 AL139125.2-201ENST00000623134 1869 ntBASIC24.28■■□□□ 1.48
BEST1O76090 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC24.27■■□□□ 1.48
BEST1O76090 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
BEST1O76090 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
BEST1O76090 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
BEST1O76090 CD72-202ENST00000378430 585 ntTSL 3 BASIC24.27■■□□□ 1.48
BEST1O76090 MIR6724-1-201ENST00000616420 92 ntBASIC24.27■■□□□ 1.48
BEST1O76090 MIR6724-2-201ENST00000616483 92 ntBASIC24.27■■□□□ 1.48
BEST1O76090 MIR6724-4-201ENST00000617390 92 ntBASIC24.27■■□□□ 1.48
BEST1O76090 MIR6724-3-201ENST00000622482 92 ntBASIC24.27■■□□□ 1.48
BEST1O76090 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC24.27■■□□□ 1.48
BEST1O76090 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
BEST1O76090 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.47
BEST1O76090 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
BEST1O76090 CD37-213ENST00000598095 1598 ntTSL 2 BASIC24.26■■□□□ 1.47
BEST1O76090 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC24.26■■□□□ 1.47
BEST1O76090 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
BEST1O76090 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
BEST1O76090 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
BEST1O76090 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
BEST1O76090 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
BEST1O76090 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
BEST1O76090 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
BEST1O76090 STK32C-205ENST00000456004 607 ntTSL 2 BASIC24.25■■□□□ 1.47
BEST1O76090 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC24.25■■□□□ 1.47
BEST1O76090 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC24.25■■□□□ 1.47
BEST1O76090 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
BEST1O76090 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
BEST1O76090 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC24.24■■□□□ 1.47
BEST1O76090 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC24.24■■□□□ 1.47
BEST1O76090 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
BEST1O76090 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
BEST1O76090 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
BEST1O76090 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
BEST1O76090 LINC01124-201ENST00000409786 2117 ntBASIC24.23■■□□□ 1.47
BEST1O76090 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC24.23■■□□□ 1.47
BEST1O76090 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
BEST1O76090 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
BEST1O76090 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
BEST1O76090 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
BEST1O76090 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
BEST1O76090 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
BEST1O76090 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
BEST1O76090 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
BEST1O76090 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC24.22■■□□□ 1.47
BEST1O76090 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
BEST1O76090 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC24.22■■□□□ 1.47
BEST1O76090 AL117332.1-201ENST00000622628 974 ntBASIC24.22■■□□□ 1.47
BEST1O76090 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
BEST1O76090 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
BEST1O76090 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
BEST1O76090 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
BEST1O76090 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
BEST1O76090 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
BEST1O76090 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC24.2■■□□□ 1.47
BEST1O76090 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
BEST1O76090 TFPT-201ENST00000391757 774 ntTSL 5 BASIC24.2■■□□□ 1.46
BEST1O76090 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
BEST1O76090 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC24.2■■□□□ 1.46
BEST1O76090 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC24.2■■□□□ 1.46
BEST1O76090 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC24.2■■□□□ 1.46
BEST1O76090 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
BEST1O76090 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
BEST1O76090 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
BEST1O76090 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
BEST1O76090 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC24.19■■□□□ 1.46
BEST1O76090 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC24.19■■□□□ 1.46
BEST1O76090 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
BEST1O76090 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC24.19■■□□□ 1.46
BEST1O76090 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
BEST1O76090 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC24.19■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms