Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PTP4A3O75365 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.75■□□□□ 0.91
PTP4A3O75365 KRT18P60-201ENST00000312876 1297 ntBASIC20.75■□□□□ 0.91
PTP4A3O75365 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTP4A3O75365 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.75■□□□□ 0.91
PTP4A3O75365 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PTP4A3O75365 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
PTP4A3O75365 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.75■□□□□ 0.91
PTP4A3O75365 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTP4A3O75365 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PTP4A3O75365 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTP4A3O75365 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PTP4A3O75365 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTP4A3O75365 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.74■□□□□ 0.91
PTP4A3O75365 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
PTP4A3O75365 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PTP4A3O75365 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PTP4A3O75365 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PTP4A3O75365 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PTP4A3O75365 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
PTP4A3O75365 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
PTP4A3O75365 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTP4A3O75365 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTP4A3O75365 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.73■□□□□ 0.91
PTP4A3O75365 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTP4A3O75365 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTP4A3O75365 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
PTP4A3O75365 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTP4A3O75365 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTP4A3O75365 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
PTP4A3O75365 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.73■□□□□ 0.91
PTP4A3O75365 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
PTP4A3O75365 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.73■□□□□ 0.91
PTP4A3O75365 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.72■□□□□ 0.91
PTP4A3O75365 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PTP4A3O75365 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTP4A3O75365 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTP4A3O75365 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTP4A3O75365 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTP4A3O75365 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTP4A3O75365 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTP4A3O75365 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PTP4A3O75365 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTP4A3O75365 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTP4A3O75365 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.71■□□□□ 0.91
PTP4A3O75365 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTP4A3O75365 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.71■□□□□ 0.91
PTP4A3O75365 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.7■□□□□ 0.9
PTP4A3O75365 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTP4A3O75365 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTP4A3O75365 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTP4A3O75365 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.7■□□□□ 0.9
PTP4A3O75365 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.7■□□□□ 0.9
PTP4A3O75365 AC019171.1-201ENST00000601251 1056 ntBASIC20.7■□□□□ 0.9
PTP4A3O75365 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.7■□□□□ 0.9
PTP4A3O75365 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.7■□□□□ 0.9
PTP4A3O75365 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
PTP4A3O75365 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTP4A3O75365 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.7■□□□□ 0.9
PTP4A3O75365 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTP4A3O75365 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PTP4A3O75365 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PTP4A3O75365 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTP4A3O75365 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PTP4A3O75365 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.69■□□□□ 0.9
PTP4A3O75365 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTP4A3O75365 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.69■□□□□ 0.9
PTP4A3O75365 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTP4A3O75365 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.68■□□□□ 0.9
PTP4A3O75365 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTP4A3O75365 C9orf163-202ENST00000624034 2573 ntBASIC20.67■□□□□ 0.9
PTP4A3O75365 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTP4A3O75365 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.67■□□□□ 0.9
PTP4A3O75365 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
PTP4A3O75365 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.67■□□□□ 0.9
PTP4A3O75365 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTP4A3O75365 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTP4A3O75365 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTP4A3O75365 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.67■□□□□ 0.9
PTP4A3O75365 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PTP4A3O75365 AC011551.1-201ENST00000614101 683 ntBASIC20.67■□□□□ 0.9
PTP4A3O75365 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PTP4A3O75365 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTP4A3O75365 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTP4A3O75365 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
PTP4A3O75365 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTP4A3O75365 AL022069.1-201ENST00000568025 1636 ntBASIC20.67■□□□□ 0.9
PTP4A3O75365 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTP4A3O75365 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTP4A3O75365 ANOS2P-203ENST00000472227 1816 ntBASIC20.67■□□□□ 0.9
PTP4A3O75365 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.66■□□□□ 0.9
PTP4A3O75365 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.66■□□□□ 0.9
PTP4A3O75365 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.66■□□□□ 0.9
PTP4A3O75365 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTP4A3O75365 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTP4A3O75365 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTP4A3O75365 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.66■□□□□ 0.9
PTP4A3O75365 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTP4A3O75365 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.66■□□□□ 0.9
PTP4A3O75365 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms