Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.64■■□□□ 1.05
RNF6Q9Y252 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RNF6Q9Y252 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RNF6Q9Y252 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.64■■□□□ 1.05
RNF6Q9Y252 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RNF6Q9Y252 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RNF6Q9Y252 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.63■■□□□ 1.05
RNF6Q9Y252 AL031848.2-201ENST00000607670 837 ntBASIC21.63■■□□□ 1.05
RNF6Q9Y252 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF6Q9Y252 AC141586.4-201ENST00000624558 1573 ntBASIC21.62■■□□□ 1.05
RNF6Q9Y252 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
RNF6Q9Y252 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RNF6Q9Y252 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF6Q9Y252 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.62■■□□□ 1.05
RNF6Q9Y252 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF6Q9Y252 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.62■■□□□ 1.05
RNF6Q9Y252 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RNF6Q9Y252 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.62■■□□□ 1.05
RNF6Q9Y252 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.62■■□□□ 1.05
RNF6Q9Y252 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
RNF6Q9Y252 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
RNF6Q9Y252 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF6Q9Y252 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RNF6Q9Y252 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF6Q9Y252 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF6Q9Y252 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
RNF6Q9Y252 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.61■■□□□ 1.05
RNF6Q9Y252 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.61■■□□□ 1.05
RNF6Q9Y252 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF6Q9Y252 AL592295.1-201ENST00000400984 884 ntBASIC21.61■■□□□ 1.05
RNF6Q9Y252 GUSBP5-201ENST00000418136 578 ntBASIC21.61■■□□□ 1.05
RNF6Q9Y252 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF6Q9Y252 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RNF6Q9Y252 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.61■■□□□ 1.05
RNF6Q9Y252 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RNF6Q9Y252 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.6■■□□□ 1.05
RNF6Q9Y252 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RNF6Q9Y252 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
RNF6Q9Y252 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.6■■□□□ 1.05
RNF6Q9Y252 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.6■■□□□ 1.05
RNF6Q9Y252 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RNF6Q9Y252 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
RNF6Q9Y252 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RNF6Q9Y252 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
RNF6Q9Y252 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RNF6Q9Y252 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF6Q9Y252 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF6Q9Y252 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RNF6Q9Y252 AC087393.1-201ENST00000582896 145 ntBASIC21.59■■□□□ 1.05
RNF6Q9Y252 AC131212.1-201ENST00000613771 668 ntBASIC21.59■■□□□ 1.05
RNF6Q9Y252 DUSP8P5-201ENST00000422884 1815 ntBASIC21.59■■□□□ 1.05
RNF6Q9Y252 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.59■■□□□ 1.05
RNF6Q9Y252 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RNF6Q9Y252 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RNF6Q9Y252 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
RNF6Q9Y252 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
RNF6Q9Y252 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RNF6Q9Y252 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
RNF6Q9Y252 AC019171.1-201ENST00000601251 1056 ntBASIC21.58■■□□□ 1.05
RNF6Q9Y252 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
RNF6Q9Y252 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RNF6Q9Y252 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.58■■□□□ 1.04
RNF6Q9Y252 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.57■■□□□ 1.04
RNF6Q9Y252 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF6Q9Y252 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF6Q9Y252 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RNF6Q9Y252 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF6Q9Y252 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF6Q9Y252 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.57■■□□□ 1.04
RNF6Q9Y252 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF6Q9Y252 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.56■■□□□ 1.04
RNF6Q9Y252 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RNF6Q9Y252 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
RNF6Q9Y252 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF6Q9Y252 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.56■■□□□ 1.04
RNF6Q9Y252 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
RNF6Q9Y252 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF6Q9Y252 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF6Q9Y252 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF6Q9Y252 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF6Q9Y252 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.55■■□□□ 1.04
RNF6Q9Y252 RPS2P7-201ENST00000447334 885 ntBASIC21.55■■□□□ 1.04
RNF6Q9Y252 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.55■■□□□ 1.04
RNF6Q9Y252 THA1P-201ENST00000590384 1145 ntBASIC21.55■■□□□ 1.04
RNF6Q9Y252 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.55■■□□□ 1.04
RNF6Q9Y252 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.55■■□□□ 1.04
RNF6Q9Y252 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
RNF6Q9Y252 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RNF6Q9Y252 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF6Q9Y252 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF6Q9Y252 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF6Q9Y252 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.54■■□□□ 1.04
RNF6Q9Y252 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF6Q9Y252 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.54■■□□□ 1.04
RNF6Q9Y252 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
RNF6Q9Y252 AC004812.2-201ENST00000611079 2094 ntBASIC21.54■■□□□ 1.04
RNF6Q9Y252 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RNF6Q9Y252 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
RNF6Q9Y252 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.53■■□□□ 1.04
RNF6Q9Y252 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 142.6 ms