Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.64■■□□□ 1.05
RNF6Q9Y252 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RNF6Q9Y252 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RNF6Q9Y252 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.64■■□□□ 1.05
RNF6Q9Y252 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RNF6Q9Y252 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RNF6Q9Y252 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.63■■□□□ 1.05
RNF6Q9Y252 AL031848.2-201ENST00000607670 837 ntBASIC21.63■■□□□ 1.05
RNF6Q9Y252 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF6Q9Y252 AC141586.4-201ENST00000624558 1573 ntBASIC21.62■■□□□ 1.05
RNF6Q9Y252 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
RNF6Q9Y252 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RNF6Q9Y252 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF6Q9Y252 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.62■■□□□ 1.05
RNF6Q9Y252 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF6Q9Y252 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.62■■□□□ 1.05
RNF6Q9Y252 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RNF6Q9Y252 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.62■■□□□ 1.05
RNF6Q9Y252 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.62■■□□□ 1.05
RNF6Q9Y252 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
RNF6Q9Y252 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
RNF6Q9Y252 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF6Q9Y252 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RNF6Q9Y252 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF6Q9Y252 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF6Q9Y252 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
RNF6Q9Y252 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.61■■□□□ 1.05
RNF6Q9Y252 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.61■■□□□ 1.05
RNF6Q9Y252 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF6Q9Y252 AL592295.1-201ENST00000400984 884 ntBASIC21.61■■□□□ 1.05
RNF6Q9Y252 GUSBP5-201ENST00000418136 578 ntBASIC21.61■■□□□ 1.05
RNF6Q9Y252 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF6Q9Y252 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RNF6Q9Y252 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.61■■□□□ 1.05
RNF6Q9Y252 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RNF6Q9Y252 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.6■■□□□ 1.05
RNF6Q9Y252 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RNF6Q9Y252 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
RNF6Q9Y252 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.6■■□□□ 1.05
RNF6Q9Y252 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.6■■□□□ 1.05
RNF6Q9Y252 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RNF6Q9Y252 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
RNF6Q9Y252 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RNF6Q9Y252 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
RNF6Q9Y252 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RNF6Q9Y252 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF6Q9Y252 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF6Q9Y252 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RNF6Q9Y252 AC087393.1-201ENST00000582896 145 ntBASIC21.59■■□□□ 1.05
RNF6Q9Y252 AC131212.1-201ENST00000613771 668 ntBASIC21.59■■□□□ 1.05
RNF6Q9Y252 DUSP8P5-201ENST00000422884 1815 ntBASIC21.59■■□□□ 1.05
RNF6Q9Y252 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.59■■□□□ 1.05
RNF6Q9Y252 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RNF6Q9Y252 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RNF6Q9Y252 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
RNF6Q9Y252 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
RNF6Q9Y252 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RNF6Q9Y252 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
RNF6Q9Y252 AC019171.1-201ENST00000601251 1056 ntBASIC21.58■■□□□ 1.05
RNF6Q9Y252 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
RNF6Q9Y252 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RNF6Q9Y252 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.58■■□□□ 1.04
RNF6Q9Y252 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.57■■□□□ 1.04
RNF6Q9Y252 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF6Q9Y252 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF6Q9Y252 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RNF6Q9Y252 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF6Q9Y252 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF6Q9Y252 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.57■■□□□ 1.04
RNF6Q9Y252 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF6Q9Y252 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.56■■□□□ 1.04
RNF6Q9Y252 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RNF6Q9Y252 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
RNF6Q9Y252 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF6Q9Y252 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.56■■□□□ 1.04
RNF6Q9Y252 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
RNF6Q9Y252 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF6Q9Y252 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF6Q9Y252 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF6Q9Y252 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF6Q9Y252 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.55■■□□□ 1.04
RNF6Q9Y252 RPS2P7-201ENST00000447334 885 ntBASIC21.55■■□□□ 1.04
RNF6Q9Y252 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.55■■□□□ 1.04
RNF6Q9Y252 THA1P-201ENST00000590384 1145 ntBASIC21.55■■□□□ 1.04
RNF6Q9Y252 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.55■■□□□ 1.04
RNF6Q9Y252 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.55■■□□□ 1.04
RNF6Q9Y252 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
RNF6Q9Y252 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RNF6Q9Y252 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF6Q9Y252 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF6Q9Y252 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF6Q9Y252 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.54■■□□□ 1.04
RNF6Q9Y252 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF6Q9Y252 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.54■■□□□ 1.04
RNF6Q9Y252 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
RNF6Q9Y252 AC004812.2-201ENST00000611079 2094 ntBASIC21.54■■□□□ 1.04
RNF6Q9Y252 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RNF6Q9Y252 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
RNF6Q9Y252 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.53■■□□□ 1.04
RNF6Q9Y252 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms