Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 MIR6724-1-201ENST00000616420 92 ntBASIC20.74■□□□□ 0.91
FOXD3Q9UJU5 MIR6724-2-201ENST00000616483 92 ntBASIC20.74■□□□□ 0.91
FOXD3Q9UJU5 MIR6724-4-201ENST00000617390 92 ntBASIC20.74■□□□□ 0.91
FOXD3Q9UJU5 MIR6724-3-201ENST00000622482 92 ntBASIC20.74■□□□□ 0.91
FOXD3Q9UJU5 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
FOXD3Q9UJU5 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.74■□□□□ 0.91
FOXD3Q9UJU5 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
FOXD3Q9UJU5 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FOXD3Q9UJU5 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
FOXD3Q9UJU5 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.73■□□□□ 0.91
FOXD3Q9UJU5 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.73■□□□□ 0.91
FOXD3Q9UJU5 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
FOXD3Q9UJU5 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.73■□□□□ 0.91
FOXD3Q9UJU5 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FOXD3Q9UJU5 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.73■□□□□ 0.91
FOXD3Q9UJU5 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXD3Q9UJU5 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXD3Q9UJU5 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
FOXD3Q9UJU5 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.72■□□□□ 0.91
FOXD3Q9UJU5 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.72■□□□□ 0.91
FOXD3Q9UJU5 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.72■□□□□ 0.91
FOXD3Q9UJU5 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.72■□□□□ 0.91
FOXD3Q9UJU5 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.72■□□□□ 0.91
FOXD3Q9UJU5 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXD3Q9UJU5 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.72■□□□□ 0.91
FOXD3Q9UJU5 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXD3Q9UJU5 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXD3Q9UJU5 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
FOXD3Q9UJU5 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.71■□□□□ 0.91
FOXD3Q9UJU5 AC090877.2-201ENST00000558441 1738 ntBASIC20.71■□□□□ 0.91
FOXD3Q9UJU5 AL356740.2-201ENST00000601559 647 ntBASIC20.71■□□□□ 0.91
FOXD3Q9UJU5 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
FOXD3Q9UJU5 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
FOXD3Q9UJU5 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
FOXD3Q9UJU5 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
FOXD3Q9UJU5 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXD3Q9UJU5 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXD3Q9UJU5 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.7■□□□□ 0.9
FOXD3Q9UJU5 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
FOXD3Q9UJU5 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.7■□□□□ 0.9
FOXD3Q9UJU5 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
FOXD3Q9UJU5 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
FOXD3Q9UJU5 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
FOXD3Q9UJU5 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
FOXD3Q9UJU5 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.69■□□□□ 0.9
FOXD3Q9UJU5 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.69■□□□□ 0.9
FOXD3Q9UJU5 MIR3621-201ENST00000580529 85 ntBASIC20.69■□□□□ 0.9
FOXD3Q9UJU5 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.69■□□□□ 0.9
FOXD3Q9UJU5 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
FOXD3Q9UJU5 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FOXD3Q9UJU5 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FOXD3Q9UJU5 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.68■□□□□ 0.9
FOXD3Q9UJU5 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FOXD3Q9UJU5 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.68■□□□□ 0.9
FOXD3Q9UJU5 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
FOXD3Q9UJU5 AL117332.1-201ENST00000622628 974 ntBASIC20.68■□□□□ 0.9
FOXD3Q9UJU5 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.68■□□□□ 0.9
FOXD3Q9UJU5 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FOXD3Q9UJU5 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FOXD3Q9UJU5 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.68■□□□□ 0.9
FOXD3Q9UJU5 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXD3Q9UJU5 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.68■□□□□ 0.9
FOXD3Q9UJU5 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXD3Q9UJU5 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.67■□□□□ 0.9
FOXD3Q9UJU5 AL139125.2-201ENST00000623134 1869 ntBASIC20.67■□□□□ 0.9
FOXD3Q9UJU5 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
FOXD3Q9UJU5 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.67■□□□□ 0.9
FOXD3Q9UJU5 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.67■□□□□ 0.9
FOXD3Q9UJU5 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXD3Q9UJU5 AL139246.5-201ENST00000606645 996 ntBASIC20.67■□□□□ 0.9
FOXD3Q9UJU5 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXD3Q9UJU5 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
FOXD3Q9UJU5 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXD3Q9UJU5 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXD3Q9UJU5 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
FOXD3Q9UJU5 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXD3Q9UJU5 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXD3Q9UJU5 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FOXD3Q9UJU5 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.66■□□□□ 0.9
FOXD3Q9UJU5 AC131281.2-201ENST00000520478 145 ntBASIC20.66■□□□□ 0.9
FOXD3Q9UJU5 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.66■□□□□ 0.9
FOXD3Q9UJU5 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FOXD3Q9UJU5 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FOXD3Q9UJU5 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXD3Q9UJU5 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
FOXD3Q9UJU5 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.65■□□□□ 0.9
FOXD3Q9UJU5 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
FOXD3Q9UJU5 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
FOXD3Q9UJU5 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
FOXD3Q9UJU5 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.65■□□□□ 0.9
FOXD3Q9UJU5 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.65■□□□□ 0.9
FOXD3Q9UJU5 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.65■□□□□ 0.9
FOXD3Q9UJU5 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.65■□□□□ 0.9
FOXD3Q9UJU5 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FOXD3Q9UJU5 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.64■□□□□ 0.9
FOXD3Q9UJU5 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
FOXD3Q9UJU5 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.64■□□□□ 0.89
FOXD3Q9UJU5 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.64■□□□□ 0.89
FOXD3Q9UJU5 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
FOXD3Q9UJU5 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms