Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC25.9■■□□□ 1.74
RNF216Q9NWF9 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
RNF216Q9NWF9 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
RNF216Q9NWF9 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.74
RNF216Q9NWF9 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.74
RNF216Q9NWF9 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
RNF216Q9NWF9 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
RNF216Q9NWF9 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
RNF216Q9NWF9 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC25.88■■□□□ 1.73
RNF216Q9NWF9 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
RNF216Q9NWF9 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
RNF216Q9NWF9 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
RNF216Q9NWF9 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
RNF216Q9NWF9 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC25.88■■□□□ 1.73
RNF216Q9NWF9 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC25.88■■□□□ 1.73
RNF216Q9NWF9 AC092028.1-203ENST00000608262 953 ntBASIC25.88■■□□□ 1.73
RNF216Q9NWF9 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC25.88■■□□□ 1.73
RNF216Q9NWF9 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
RNF216Q9NWF9 ERN1-208ENST00000606895 2068 ntBASIC25.87■■□□□ 1.73
RNF216Q9NWF9 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
RNF216Q9NWF9 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
RNF216Q9NWF9 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC25.87■■□□□ 1.73
RNF216Q9NWF9 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC25.87■■□□□ 1.73
RNF216Q9NWF9 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
RNF216Q9NWF9 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC25.86■■□□□ 1.73
RNF216Q9NWF9 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
RNF216Q9NWF9 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC25.86■■□□□ 1.73
RNF216Q9NWF9 GOSR1-204ENST00000451249 1231 ntAPPRIS ALT1 TSL 2 BASIC25.86■■□□□ 1.73
RNF216Q9NWF9 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
RNF216Q9NWF9 MIR4281-201ENST00000580852 62 ntBASIC25.86■■□□□ 1.73
RNF216Q9NWF9 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
RNF216Q9NWF9 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
RNF216Q9NWF9 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
RNF216Q9NWF9 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
RNF216Q9NWF9 THRA-202ENST00000394121 2260 ntTSL 2 BASIC25.85■■□□□ 1.73
RNF216Q9NWF9 TSPY9P-201ENST00000440215 945 ntBASIC25.85■■□□□ 1.73
RNF216Q9NWF9 TSPY11P-201ENST00000442607 1045 ntBASIC25.85■■□□□ 1.73
RNF216Q9NWF9 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC25.85■■□□□ 1.73
RNF216Q9NWF9 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
RNF216Q9NWF9 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
RNF216Q9NWF9 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
RNF216Q9NWF9 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
RNF216Q9NWF9 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
RNF216Q9NWF9 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC25.84■■□□□ 1.73
RNF216Q9NWF9 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC25.84■■□□□ 1.73
RNF216Q9NWF9 SSSCA1-AS1-201ENST00000567594 614 ntBASIC25.84■■□□□ 1.73
RNF216Q9NWF9 AC060766.1-201ENST00000590824 627 ntBASIC25.84■■□□□ 1.73
RNF216Q9NWF9 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC25.84■■□□□ 1.73
RNF216Q9NWF9 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
RNF216Q9NWF9 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC25.83■■□□□ 1.73
RNF216Q9NWF9 LTK-203ENST00000453182 2412 ntTSL 2 BASIC25.83■■□□□ 1.73
RNF216Q9NWF9 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC25.83■■□□□ 1.73
RNF216Q9NWF9 PEMT-206ENST00000435340 960 ntTSL 5 BASIC25.83■■□□□ 1.73
RNF216Q9NWF9 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC25.83■■□□□ 1.73
RNF216Q9NWF9 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC25.83■■□□□ 1.73
RNF216Q9NWF9 LSM7-203ENST00000585409 512 ntTSL 2 BASIC25.83■■□□□ 1.73
RNF216Q9NWF9 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC25.83■■□□□ 1.73
RNF216Q9NWF9 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
RNF216Q9NWF9 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
RNF216Q9NWF9 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
RNF216Q9NWF9 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RNF216Q9NWF9 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
RNF216Q9NWF9 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC25.82■■□□□ 1.72
RNF216Q9NWF9 AL391001.1-201ENST00000602747 715 ntBASIC25.82■■□□□ 1.72
RNF216Q9NWF9 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC25.82■■□□□ 1.72
RNF216Q9NWF9 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RNF216Q9NWF9 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC25.81■■□□□ 1.72
RNF216Q9NWF9 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
RNF216Q9NWF9 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC25.81■■□□□ 1.72
RNF216Q9NWF9 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
RNF216Q9NWF9 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC25.81■■□□□ 1.72
RNF216Q9NWF9 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
RNF216Q9NWF9 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
RNF216Q9NWF9 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC25.8■■□□□ 1.72
RNF216Q9NWF9 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
RNF216Q9NWF9 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
RNF216Q9NWF9 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC25.8■■□□□ 1.72
RNF216Q9NWF9 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC25.8■■□□□ 1.72
RNF216Q9NWF9 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
RNF216Q9NWF9 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
RNF216Q9NWF9 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC25.79■■□□□ 1.72
RNF216Q9NWF9 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
RNF216Q9NWF9 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC25.79■■□□□ 1.72
RNF216Q9NWF9 LINC01090-202ENST00000434418 560 ntTSL 5 BASIC25.79■■□□□ 1.72
RNF216Q9NWF9 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
RNF216Q9NWF9 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC25.79■■□□□ 1.72
RNF216Q9NWF9 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
RNF216Q9NWF9 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RNF216Q9NWF9 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
RNF216Q9NWF9 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
RNF216Q9NWF9 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
RNF216Q9NWF9 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
RNF216Q9NWF9 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
RNF216Q9NWF9 GAK-223ENST00000628912 497 ntTSL 5 BASIC25.78■■□□□ 1.72
RNF216Q9NWF9 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
RNF216Q9NWF9 SULT1A1-211ENST00000569554 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
RNF216Q9NWF9 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
RNF216Q9NWF9 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
RNF216Q9NWF9 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC25.77■■□□□ 1.72
RNF216Q9NWF9 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms