Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NKX6-2Q9C056 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NKX6-2Q9C056 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
NKX6-2Q9C056 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.65■□□□□ 0.58
NKX6-2Q9C056 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC18.65■□□□□ 0.58
NKX6-2Q9C056 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NKX6-2Q9C056 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC18.65■□□□□ 0.58
NKX6-2Q9C056 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NKX6-2Q9C056 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NKX6-2Q9C056 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.65■□□□□ 0.58
NKX6-2Q9C056 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NKX6-2Q9C056 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
NKX6-2Q9C056 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NKX6-2Q9C056 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
NKX6-2Q9C056 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC18.64■□□□□ 0.57
NKX6-2Q9C056 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NKX6-2Q9C056 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NKX6-2Q9C056 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NKX6-2Q9C056 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NKX6-2Q9C056 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
NKX6-2Q9C056 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NKX6-2Q9C056 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.63■□□□□ 0.57
NKX6-2Q9C056 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NKX6-2Q9C056 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NKX6-2Q9C056 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
NKX6-2Q9C056 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NKX6-2Q9C056 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC18.63■□□□□ 0.57
NKX6-2Q9C056 AC005559.1-201ENST00000589661 871 ntBASIC18.63■□□□□ 0.57
NKX6-2Q9C056 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.63■□□□□ 0.57
NKX6-2Q9C056 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.63■□□□□ 0.57
NKX6-2Q9C056 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NKX6-2Q9C056 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NKX6-2Q9C056 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC18.63■□□□□ 0.57
NKX6-2Q9C056 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
NKX6-2Q9C056 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
NKX6-2Q9C056 GUSBP5-202ENST00000510805 1989 ntBASIC18.62■□□□□ 0.57
NKX6-2Q9C056 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC18.62■□□□□ 0.57
NKX6-2Q9C056 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC18.62■□□□□ 0.57
NKX6-2Q9C056 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NKX6-2Q9C056 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NKX6-2Q9C056 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NKX6-2Q9C056 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NKX6-2Q9C056 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NKX6-2Q9C056 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
NKX6-2Q9C056 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.61■□□□□ 0.57
NKX6-2Q9C056 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NKX6-2Q9C056 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.61■□□□□ 0.57
NKX6-2Q9C056 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NKX6-2Q9C056 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NKX6-2Q9C056 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NKX6-2Q9C056 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NKX6-2Q9C056 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NKX6-2Q9C056 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
NKX6-2Q9C056 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
NKX6-2Q9C056 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NKX6-2Q9C056 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
NKX6-2Q9C056 CALM3-209ENST00000597743 577 ntTSL 4 BASIC18.6■□□□□ 0.57
NKX6-2Q9C056 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NKX6-2Q9C056 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NKX6-2Q9C056 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NKX6-2Q9C056 ECEL1P1-201ENST00000373592 1742 ntBASIC18.6■□□□□ 0.57
NKX6-2Q9C056 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.6■□□□□ 0.57
NKX6-2Q9C056 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NKX6-2Q9C056 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NKX6-2Q9C056 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NKX6-2Q9C056 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NKX6-2Q9C056 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.59■□□□□ 0.57
NKX6-2Q9C056 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.59■□□□□ 0.57
NKX6-2Q9C056 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NKX6-2Q9C056 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NKX6-2Q9C056 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NKX6-2Q9C056 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NKX6-2Q9C056 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
NKX6-2Q9C056 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
NKX6-2Q9C056 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC18.59■□□□□ 0.57
NKX6-2Q9C056 PEX7-203ENST00000541292 945 ntTSL 5 BASIC18.59■□□□□ 0.57
NKX6-2Q9C056 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NKX6-2Q9C056 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.59■□□□□ 0.57
NKX6-2Q9C056 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NKX6-2Q9C056 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
NKX6-2Q9C056 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NKX6-2Q9C056 AC110285.7-201ENST00000624417 1536 ntBASIC18.59■□□□□ 0.57
NKX6-2Q9C056 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NKX6-2Q9C056 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
NKX6-2Q9C056 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
NKX6-2Q9C056 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NKX6-2Q9C056 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.58■□□□□ 0.57
NKX6-2Q9C056 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
NKX6-2Q9C056 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
NKX6-2Q9C056 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NKX6-2Q9C056 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.58■□□□□ 0.57
NKX6-2Q9C056 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
NKX6-2Q9C056 AC136428.2-201ENST00000563187 214 ntBASIC18.58■□□□□ 0.56
NKX6-2Q9C056 AC097358.2-201ENST00000607541 1159 ntBASIC18.58■□□□□ 0.56
NKX6-2Q9C056 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NKX6-2Q9C056 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NKX6-2Q9C056 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.58■□□□□ 0.56
NKX6-2Q9C056 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NKX6-2Q9C056 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NKX6-2Q9C056 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms