Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PTCD2Q8WV60 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PTCD2Q8WV60 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
PTCD2Q8WV60 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.36■■□□□ 1.33
PTCD2Q8WV60 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.36■■□□□ 1.33
PTCD2Q8WV60 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.36■■□□□ 1.33
PTCD2Q8WV60 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PTCD2Q8WV60 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC23.36■■□□□ 1.33
PTCD2Q8WV60 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
PTCD2Q8WV60 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
PTCD2Q8WV60 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
PTCD2Q8WV60 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PTCD2Q8WV60 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PTCD2Q8WV60 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PTCD2Q8WV60 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
PTCD2Q8WV60 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PTCD2Q8WV60 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.35■■□□□ 1.33
PTCD2Q8WV60 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
PTCD2Q8WV60 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PTCD2Q8WV60 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PTCD2Q8WV60 TRIR-205ENST00000592273 783 ntTSL 3 BASIC23.35■■□□□ 1.33
PTCD2Q8WV60 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC23.35■■□□□ 1.33
PTCD2Q8WV60 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.35■■□□□ 1.33
PTCD2Q8WV60 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
PTCD2Q8WV60 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.35■■□□□ 1.33
PTCD2Q8WV60 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.34■■□□□ 1.33
PTCD2Q8WV60 AC004812.2-201ENST00000611079 2094 ntBASIC23.34■■□□□ 1.33
PTCD2Q8WV60 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PTCD2Q8WV60 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PTCD2Q8WV60 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.34■■□□□ 1.33
PTCD2Q8WV60 AC120024.1-201ENST00000562672 995 ntBASIC23.34■■□□□ 1.33
PTCD2Q8WV60 TK2-216ENST00000564917 1156 ntTSL 3 BASIC23.34■■□□□ 1.33
PTCD2Q8WV60 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PTCD2Q8WV60 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PTCD2Q8WV60 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.33■■□□□ 1.33
PTCD2Q8WV60 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
PTCD2Q8WV60 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC23.33■■□□□ 1.33
PTCD2Q8WV60 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC23.33■■□□□ 1.33
PTCD2Q8WV60 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PTCD2Q8WV60 AC022616.5-201ENST00000518796 181 ntBASIC23.33■■□□□ 1.33
PTCD2Q8WV60 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PTCD2Q8WV60 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
PTCD2Q8WV60 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.33■■□□□ 1.32
PTCD2Q8WV60 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.32
PTCD2Q8WV60 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC23.33■■□□□ 1.32
PTCD2Q8WV60 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PTCD2Q8WV60 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
PTCD2Q8WV60 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PTCD2Q8WV60 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
PTCD2Q8WV60 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PTCD2Q8WV60 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.32■■□□□ 1.32
PTCD2Q8WV60 AC011551.1-201ENST00000614101 683 ntBASIC23.32■■□□□ 1.32
PTCD2Q8WV60 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PTCD2Q8WV60 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.32■■□□□ 1.32
PTCD2Q8WV60 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
PTCD2Q8WV60 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PTCD2Q8WV60 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PTCD2Q8WV60 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PTCD2Q8WV60 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PTCD2Q8WV60 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.31■■□□□ 1.32
PTCD2Q8WV60 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
PTCD2Q8WV60 KRT18P24-201ENST00000344739 1156 ntBASIC23.31■■□□□ 1.32
PTCD2Q8WV60 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
PTCD2Q8WV60 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.31■■□□□ 1.32
PTCD2Q8WV60 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.31■■□□□ 1.32
PTCD2Q8WV60 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PTCD2Q8WV60 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
PTCD2Q8WV60 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PTCD2Q8WV60 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
PTCD2Q8WV60 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.3■■□□□ 1.32
PTCD2Q8WV60 AL161729.1-201ENST00000604104 1402 ntBASIC23.3■■□□□ 1.32
PTCD2Q8WV60 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PTCD2Q8WV60 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
PTCD2Q8WV60 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC23.29■■□□□ 1.32
PTCD2Q8WV60 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PTCD2Q8WV60 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC23.29■■□□□ 1.32
PTCD2Q8WV60 THA1P-201ENST00000590384 1145 ntBASIC23.29■■□□□ 1.32
PTCD2Q8WV60 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
PTCD2Q8WV60 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PTCD2Q8WV60 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PTCD2Q8WV60 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
PTCD2Q8WV60 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PTCD2Q8WV60 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PTCD2Q8WV60 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
PTCD2Q8WV60 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23.28■■□□□ 1.32
PTCD2Q8WV60 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.28■■□□□ 1.32
PTCD2Q8WV60 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC23.28■■□□□ 1.32
PTCD2Q8WV60 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
PTCD2Q8WV60 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PTCD2Q8WV60 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PTCD2Q8WV60 HES6-204ENST00000409182 863 ntTSL 2 BASIC23.27■■□□□ 1.32
PTCD2Q8WV60 AC239859.2-201ENST00000444165 318 ntBASIC23.27■■□□□ 1.32
PTCD2Q8WV60 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PTCD2Q8WV60 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
PTCD2Q8WV60 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PTCD2Q8WV60 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PTCD2Q8WV60 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PTCD2Q8WV60 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.26■■□□□ 1.31
PTCD2Q8WV60 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
PTCD2Q8WV60 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms