Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TTC9CQ8N5M4 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
TTC9CQ8N5M4 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TTC9CQ8N5M4 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC18.21■□□□□ 0.51
TTC9CQ8N5M4 AC120024.1-201ENST00000562672 995 ntBASIC18.21■□□□□ 0.51
TTC9CQ8N5M4 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC18.21■□□□□ 0.51
TTC9CQ8N5M4 MIR4508-201ENST00000584178 70 ntBASIC18.21■□□□□ 0.51
TTC9CQ8N5M4 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TTC9CQ8N5M4 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
TTC9CQ8N5M4 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TTC9CQ8N5M4 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
TTC9CQ8N5M4 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TTC9CQ8N5M4 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TTC9CQ8N5M4 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TTC9CQ8N5M4 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TTC9CQ8N5M4 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC18.2■□□□□ 0.5
TTC9CQ8N5M4 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC18.2■□□□□ 0.5
TTC9CQ8N5M4 AL161729.1-201ENST00000604104 1402 ntBASIC18.2■□□□□ 0.5
TTC9CQ8N5M4 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TTC9CQ8N5M4 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TTC9CQ8N5M4 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TTC9CQ8N5M4 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TTC9CQ8N5M4 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TTC9CQ8N5M4 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TTC9CQ8N5M4 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TTC9CQ8N5M4 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TTC9CQ8N5M4 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
TTC9CQ8N5M4 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
TTC9CQ8N5M4 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TTC9CQ8N5M4 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TTC9CQ8N5M4 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC18.19■□□□□ 0.5
TTC9CQ8N5M4 THA1P-201ENST00000590384 1145 ntBASIC18.19■□□□□ 0.5
TTC9CQ8N5M4 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TTC9CQ8N5M4 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
TTC9CQ8N5M4 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TTC9CQ8N5M4 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
TTC9CQ8N5M4 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TTC9CQ8N5M4 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TTC9CQ8N5M4 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.18■□□□□ 0.5
TTC9CQ8N5M4 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TTC9CQ8N5M4 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
TTC9CQ8N5M4 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TTC9CQ8N5M4 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TTC9CQ8N5M4 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.18■□□□□ 0.5
TTC9CQ8N5M4 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC18.18■□□□□ 0.5
TTC9CQ8N5M4 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
TTC9CQ8N5M4 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TTC9CQ8N5M4 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.18■□□□□ 0.5
TTC9CQ8N5M4 AC004812.2-201ENST00000611079 2094 ntBASIC18.18■□□□□ 0.5
TTC9CQ8N5M4 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TTC9CQ8N5M4 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TTC9CQ8N5M4 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.17■□□□□ 0.5
TTC9CQ8N5M4 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
TTC9CQ8N5M4 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TTC9CQ8N5M4 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC18.17■□□□□ 0.5
TTC9CQ8N5M4 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TTC9CQ8N5M4 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.17■□□□□ 0.5
TTC9CQ8N5M4 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TTC9CQ8N5M4 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TTC9CQ8N5M4 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TTC9CQ8N5M4 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TTC9CQ8N5M4 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TTC9CQ8N5M4 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TTC9CQ8N5M4 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TTC9CQ8N5M4 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TTC9CQ8N5M4 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC18.17■□□□□ 0.5
TTC9CQ8N5M4 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.17■□□□□ 0.5
TTC9CQ8N5M4 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.5
TTC9CQ8N5M4 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TTC9CQ8N5M4 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.16■□□□□ 0.5
TTC9CQ8N5M4 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.16■□□□□ 0.5
TTC9CQ8N5M4 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TTC9CQ8N5M4 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
TTC9CQ8N5M4 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TTC9CQ8N5M4 YBX1P4-201ENST00000392794 808 ntBASIC18.16■□□□□ 0.5
TTC9CQ8N5M4 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TTC9CQ8N5M4 AC103834.1-201ENST00000520383 144 ntBASIC18.16■□□□□ 0.5
TTC9CQ8N5M4 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TTC9CQ8N5M4 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.16■□□□□ 0.5
TTC9CQ8N5M4 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TTC9CQ8N5M4 THRA-202ENST00000394121 2260 ntTSL 2 BASIC18.16■□□□□ 0.5
TTC9CQ8N5M4 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TTC9CQ8N5M4 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TTC9CQ8N5M4 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC18.15■□□□□ 0.5
TTC9CQ8N5M4 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TTC9CQ8N5M4 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TTC9CQ8N5M4 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TTC9CQ8N5M4 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.15■□□□□ 0.5
TTC9CQ8N5M4 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TTC9CQ8N5M4 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TTC9CQ8N5M4 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TTC9CQ8N5M4 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TTC9CQ8N5M4 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
TTC9CQ8N5M4 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TTC9CQ8N5M4 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TTC9CQ8N5M4 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TTC9CQ8N5M4 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.14■□□□□ 0.49
TTC9CQ8N5M4 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.14■□□□□ 0.49
TTC9CQ8N5M4 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.14■□□□□ 0.49
TTC9CQ8N5M4 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms