Protein–RNA interactions for Protein: Q8IWR1

TRIM59, Tripartite motif-containing protein 59, humanhuman

Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59Q8IWR1 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
TRIM59Q8IWR1 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC25.19■■□□□ 1.62
TRIM59Q8IWR1 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
TRIM59Q8IWR1 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
TRIM59Q8IWR1 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
TRIM59Q8IWR1 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
TRIM59Q8IWR1 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC25.19■■□□□ 1.62
TRIM59Q8IWR1 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
TRIM59Q8IWR1 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC25.19■■□□□ 1.62
TRIM59Q8IWR1 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC25.19■■□□□ 1.62
TRIM59Q8IWR1 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
TRIM59Q8IWR1 PVT1_1.1-201ENST00000615125 194 ntBASIC25.19■■□□□ 1.62
TRIM59Q8IWR1 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
TRIM59Q8IWR1 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
TRIM59Q8IWR1 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
TRIM59Q8IWR1 TSPY13P-201ENST00000338964 914 ntBASIC25.18■■□□□ 1.62
TRIM59Q8IWR1 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
TRIM59Q8IWR1 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
TRIM59Q8IWR1 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
TRIM59Q8IWR1 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
TRIM59Q8IWR1 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
TRIM59Q8IWR1 CD37-213ENST00000598095 1598 ntTSL 2 BASIC25.18■■□□□ 1.62
TRIM59Q8IWR1 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
TRIM59Q8IWR1 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
TRIM59Q8IWR1 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC25.17■■□□□ 1.62
TRIM59Q8IWR1 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
TRIM59Q8IWR1 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
TRIM59Q8IWR1 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC25.17■■□□□ 1.62
TRIM59Q8IWR1 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC25.17■■□□□ 1.62
TRIM59Q8IWR1 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
TRIM59Q8IWR1 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
TRIM59Q8IWR1 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
TRIM59Q8IWR1 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
TRIM59Q8IWR1 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
TRIM59Q8IWR1 AC074183.2-201ENST00000623112 922 ntBASIC25.16■■□□□ 1.62
TRIM59Q8IWR1 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
TRIM59Q8IWR1 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
TRIM59Q8IWR1 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
TRIM59Q8IWR1 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
TRIM59Q8IWR1 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
TRIM59Q8IWR1 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
TRIM59Q8IWR1 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
TRIM59Q8IWR1 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
TRIM59Q8IWR1 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC25.14■■□□□ 1.62
TRIM59Q8IWR1 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
TRIM59Q8IWR1 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
TRIM59Q8IWR1 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC25.14■■□□□ 1.62
TRIM59Q8IWR1 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
TRIM59Q8IWR1 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
TRIM59Q8IWR1 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC25.14■■□□□ 1.61
TRIM59Q8IWR1 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
TRIM59Q8IWR1 BHLHE23-202ENST00000612929 1109 ntBASIC25.13■■□□□ 1.61
TRIM59Q8IWR1 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
TRIM59Q8IWR1 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC25.13■■□□□ 1.61
TRIM59Q8IWR1 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC25.13■■□□□ 1.61
TRIM59Q8IWR1 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
TRIM59Q8IWR1 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
TRIM59Q8IWR1 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC25.12■■□□□ 1.61
TRIM59Q8IWR1 AL161729.1-201ENST00000604104 1402 ntBASIC25.12■■□□□ 1.61
TRIM59Q8IWR1 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
TRIM59Q8IWR1 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
TRIM59Q8IWR1 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
TRIM59Q8IWR1 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
TRIM59Q8IWR1 GUK1-208ENST00000366728 842 ntTSL 2 BASIC25.12■■□□□ 1.61
TRIM59Q8IWR1 BEX3-202ENST00000372634 753 ntTSL 2 BASIC25.12■■□□□ 1.61
TRIM59Q8IWR1 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
TRIM59Q8IWR1 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
TRIM59Q8IWR1 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
TRIM59Q8IWR1 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
TRIM59Q8IWR1 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC25.11■■□□□ 1.61
TRIM59Q8IWR1 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC25.11■■□□□ 1.61
TRIM59Q8IWR1 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC25.11■■□□□ 1.61
TRIM59Q8IWR1 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC25.11■■□□□ 1.61
TRIM59Q8IWR1 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
TRIM59Q8IWR1 GAK-223ENST00000628912 497 ntTSL 5 BASIC25.11■■□□□ 1.61
TRIM59Q8IWR1 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC25.11■■□□□ 1.61
TRIM59Q8IWR1 CASK-201ENST00000378154 2494 ntTSL 5 BASIC25.11■■□□□ 1.61
TRIM59Q8IWR1 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC25.11■■□□□ 1.61
TRIM59Q8IWR1 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC25.11■■□□□ 1.61
TRIM59Q8IWR1 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
TRIM59Q8IWR1 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
TRIM59Q8IWR1 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
TRIM59Q8IWR1 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
TRIM59Q8IWR1 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC25.1■■□□□ 1.61
TRIM59Q8IWR1 AC010980.1-201ENST00000587192 1142 ntBASIC25.1■■□□□ 1.61
TRIM59Q8IWR1 AC012354.3-201ENST00000623734 483 ntBASIC25.1■■□□□ 1.61
TRIM59Q8IWR1 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
TRIM59Q8IWR1 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
TRIM59Q8IWR1 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
TRIM59Q8IWR1 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC25.1■■□□□ 1.61
TRIM59Q8IWR1 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC25.1■■□□□ 1.61
TRIM59Q8IWR1 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
TRIM59Q8IWR1 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
TRIM59Q8IWR1 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC25.09■■□□□ 1.61
TRIM59Q8IWR1 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
TRIM59Q8IWR1 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC25.09■■□□□ 1.61
TRIM59Q8IWR1 AC120024.1-201ENST00000562672 995 ntBASIC25.09■■□□□ 1.61
TRIM59Q8IWR1 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
TRIM59Q8IWR1 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
TRIM59Q8IWR1 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms