Protein–RNA interactions for Protein: Q86TM6

SYVN1, E3 ubiquitin-protein ligase synoviolin, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1Q86TM6 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
SYVN1Q86TM6 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
SYVN1Q86TM6 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
SYVN1Q86TM6 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
SYVN1Q86TM6 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
SYVN1Q86TM6 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SYVN1Q86TM6 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC22.68■■□□□ 1.22
SYVN1Q86TM6 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SYVN1Q86TM6 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
SYVN1Q86TM6 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
SYVN1Q86TM6 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC22.68■■□□□ 1.22
SYVN1Q86TM6 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SYVN1Q86TM6 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
SYVN1Q86TM6 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC22.68■■□□□ 1.22
SYVN1Q86TM6 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
SYVN1Q86TM6 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SYVN1Q86TM6 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
SYVN1Q86TM6 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
SYVN1Q86TM6 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SYVN1Q86TM6 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
SYVN1Q86TM6 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
SYVN1Q86TM6 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
SYVN1Q86TM6 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC22.67■■□□□ 1.22
SYVN1Q86TM6 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SYVN1Q86TM6 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
SYVN1Q86TM6 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SYVN1Q86TM6 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SYVN1Q86TM6 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SYVN1Q86TM6 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SYVN1Q86TM6 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.66■■□□□ 1.22
SYVN1Q86TM6 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC22.66■■□□□ 1.22
SYVN1Q86TM6 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC22.66■■□□□ 1.22
SYVN1Q86TM6 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC22.66■■□□□ 1.22
SYVN1Q86TM6 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SYVN1Q86TM6 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SYVN1Q86TM6 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
SYVN1Q86TM6 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
SYVN1Q86TM6 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
SYVN1Q86TM6 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC22.65■■□□□ 1.22
SYVN1Q86TM6 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC22.65■■□□□ 1.22
SYVN1Q86TM6 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
SYVN1Q86TM6 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SYVN1Q86TM6 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
SYVN1Q86TM6 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
SYVN1Q86TM6 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SYVN1Q86TM6 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
SYVN1Q86TM6 TK2-216ENST00000564917 1156 ntTSL 3 BASIC22.64■■□□□ 1.21
SYVN1Q86TM6 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
SYVN1Q86TM6 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.64■■□□□ 1.21
SYVN1Q86TM6 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SYVN1Q86TM6 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SYVN1Q86TM6 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SYVN1Q86TM6 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SYVN1Q86TM6 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC22.63■■□□□ 1.21
SYVN1Q86TM6 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SYVN1Q86TM6 RNF146-205ENST00000477776 762 ntTSL 3 BASIC22.63■■□□□ 1.21
SYVN1Q86TM6 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC22.63■■□□□ 1.21
SYVN1Q86TM6 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.63■■□□□ 1.21
SYVN1Q86TM6 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
SYVN1Q86TM6 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SYVN1Q86TM6 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.62■■□□□ 1.21
SYVN1Q86TM6 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
SYVN1Q86TM6 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SYVN1Q86TM6 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SYVN1Q86TM6 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
SYVN1Q86TM6 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.62■■□□□ 1.21
SYVN1Q86TM6 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC22.62■■□□□ 1.21
SYVN1Q86TM6 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SYVN1Q86TM6 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22.62■■□□□ 1.21
SYVN1Q86TM6 ABCB10P4-201ENST00000566803 2184 ntBASIC22.62■■□□□ 1.21
SYVN1Q86TM6 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.61■■□□□ 1.21
SYVN1Q86TM6 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SYVN1Q86TM6 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
SYVN1Q86TM6 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.61■■□□□ 1.21
SYVN1Q86TM6 AC022616.5-201ENST00000518796 181 ntBASIC22.61■■□□□ 1.21
SYVN1Q86TM6 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
SYVN1Q86TM6 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SYVN1Q86TM6 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SYVN1Q86TM6 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
SYVN1Q86TM6 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.6■■□□□ 1.21
SYVN1Q86TM6 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC22.6■■□□□ 1.21
SYVN1Q86TM6 Z92544.1-202ENST00000571933 1220 ntBASIC22.6■■□□□ 1.21
SYVN1Q86TM6 AC131212.1-201ENST00000613771 668 ntBASIC22.6■■□□□ 1.21
SYVN1Q86TM6 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.6■■□□□ 1.21
SYVN1Q86TM6 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
SYVN1Q86TM6 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SYVN1Q86TM6 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SYVN1Q86TM6 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
SYVN1Q86TM6 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC22.59■■□□□ 1.21
SYVN1Q86TM6 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SYVN1Q86TM6 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC22.59■■□□□ 1.21
SYVN1Q86TM6 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SYVN1Q86TM6 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SYVN1Q86TM6 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC22.59■■□□□ 1.21
SYVN1Q86TM6 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
SYVN1Q86TM6 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SYVN1Q86TM6 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SYVN1Q86TM6 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SYVN1Q86TM6 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SYVN1Q86TM6 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC22.58■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms