Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 REST-206ENST00000612429 1376 ntTSL 5 BASIC31.78■■■□□ 2.68
KRT28Q7Z3Y7 REST-207ENST00000616975 1370 ntTSL 5 BASIC31.78■■■□□ 2.68
KRT28Q7Z3Y7 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC31.77■■■□□ 2.68
KRT28Q7Z3Y7 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC31.77■■■□□ 2.68
KRT28Q7Z3Y7 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC31.77■■■□□ 2.68
KRT28Q7Z3Y7 RHOF-204ENST00000537265 699 ntTSL 2 BASIC31.77■■■□□ 2.68
KRT28Q7Z3Y7 AC011298.3-201ENST00000615796 283 ntBASIC31.77■■■□□ 2.68
KRT28Q7Z3Y7 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC31.77■■■□□ 2.68
KRT28Q7Z3Y7 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC31.77■■■□□ 2.68
KRT28Q7Z3Y7 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC31.77■■■□□ 2.68
KRT28Q7Z3Y7 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC31.77■■■□□ 2.68
KRT28Q7Z3Y7 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
KRT28Q7Z3Y7 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC31.76■■■□□ 2.68
KRT28Q7Z3Y7 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
KRT28Q7Z3Y7 AC099791.1-201ENST00000416440 715 ntBASIC31.76■■■□□ 2.67
KRT28Q7Z3Y7 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
KRT28Q7Z3Y7 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC31.76■■■□□ 2.67
KRT28Q7Z3Y7 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC31.76■■■□□ 2.67
KRT28Q7Z3Y7 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
KRT28Q7Z3Y7 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
KRT28Q7Z3Y7 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
KRT28Q7Z3Y7 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC31.75■■■□□ 2.67
KRT28Q7Z3Y7 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
KRT28Q7Z3Y7 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
KRT28Q7Z3Y7 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
KRT28Q7Z3Y7 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC31.74■■■□□ 2.67
KRT28Q7Z3Y7 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
KRT28Q7Z3Y7 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC31.74■■■□□ 2.67
KRT28Q7Z3Y7 AL138724.1-201ENST00000606771 1088 ntBASIC31.74■■■□□ 2.67
KRT28Q7Z3Y7 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
KRT28Q7Z3Y7 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
KRT28Q7Z3Y7 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
KRT28Q7Z3Y7 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
KRT28Q7Z3Y7 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC31.73■■■□□ 2.67
KRT28Q7Z3Y7 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
KRT28Q7Z3Y7 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
KRT28Q7Z3Y7 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
KRT28Q7Z3Y7 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
KRT28Q7Z3Y7 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
KRT28Q7Z3Y7 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
KRT28Q7Z3Y7 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC31.71■■■□□ 2.67
KRT28Q7Z3Y7 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
KRT28Q7Z3Y7 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
KRT28Q7Z3Y7 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC31.71■■■□□ 2.67
KRT28Q7Z3Y7 AC142086.6-201ENST00000621154 1765 ntBASIC31.71■■■□□ 2.67
KRT28Q7Z3Y7 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
KRT28Q7Z3Y7 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC31.7■■■□□ 2.66
KRT28Q7Z3Y7 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
KRT28Q7Z3Y7 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC31.69■■■□□ 2.66
KRT28Q7Z3Y7 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC31.69■■■□□ 2.66
KRT28Q7Z3Y7 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
KRT28Q7Z3Y7 AC090192.1-201ENST00000517740 490 ntBASIC31.69■■■□□ 2.66
KRT28Q7Z3Y7 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC31.69■■■□□ 2.66
KRT28Q7Z3Y7 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
KRT28Q7Z3Y7 ERN1-208ENST00000606895 2068 ntBASIC31.69■■■□□ 2.66
KRT28Q7Z3Y7 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC31.68■■■□□ 2.66
KRT28Q7Z3Y7 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
KRT28Q7Z3Y7 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC31.68■■■□□ 2.66
KRT28Q7Z3Y7 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC31.68■■■□□ 2.66
KRT28Q7Z3Y7 RARRES2P11-201ENST00000635158 484 ntBASIC31.68■■■□□ 2.66
KRT28Q7Z3Y7 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
KRT28Q7Z3Y7 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC31.67■■■□□ 2.66
KRT28Q7Z3Y7 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC31.67■■■□□ 2.66
KRT28Q7Z3Y7 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
KRT28Q7Z3Y7 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC31.66■■■□□ 2.66
KRT28Q7Z3Y7 SP2-202ENST00000613139 908 ntTSL 5 BASIC31.66■■■□□ 2.66
KRT28Q7Z3Y7 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC31.66■■■□□ 2.66
KRT28Q7Z3Y7 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC31.66■■■□□ 2.66
KRT28Q7Z3Y7 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC31.66■■■□□ 2.66
KRT28Q7Z3Y7 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC31.65■■■□□ 2.66
KRT28Q7Z3Y7 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC31.65■■■□□ 2.66
KRT28Q7Z3Y7 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC31.65■■■□□ 2.66
KRT28Q7Z3Y7 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC31.65■■■□□ 2.66
KRT28Q7Z3Y7 AC009102.2-201ENST00000606772 1639 ntBASIC31.65■■■□□ 2.66
KRT28Q7Z3Y7 HES6-206ENST00000409574 738 ntTSL 2 BASIC31.65■■■□□ 2.66
KRT28Q7Z3Y7 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC31.65■■■□□ 2.66
KRT28Q7Z3Y7 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
KRT28Q7Z3Y7 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC31.65■■■□□ 2.66
KRT28Q7Z3Y7 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC31.65■■■□□ 2.66
KRT28Q7Z3Y7 AC131274.2-201ENST00000580697 1507 ntBASIC31.65■■■□□ 2.66
KRT28Q7Z3Y7 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
KRT28Q7Z3Y7 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
KRT28Q7Z3Y7 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
KRT28Q7Z3Y7 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
KRT28Q7Z3Y7 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC31.64■■■□□ 2.66
KRT28Q7Z3Y7 IKBKGP1-201ENST00000612193 1073 ntBASIC31.64■■■□□ 2.66
KRT28Q7Z3Y7 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC31.64■■■□□ 2.66
KRT28Q7Z3Y7 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
KRT28Q7Z3Y7 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
KRT28Q7Z3Y7 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
KRT28Q7Z3Y7 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
KRT28Q7Z3Y7 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC31.63■■■□□ 2.65
KRT28Q7Z3Y7 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
KRT28Q7Z3Y7 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC31.63■■■□□ 2.65
KRT28Q7Z3Y7 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC31.62■■■□□ 2.65
KRT28Q7Z3Y7 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
KRT28Q7Z3Y7 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
KRT28Q7Z3Y7 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
KRT28Q7Z3Y7 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC31.62■■■□□ 2.65
KRT28Q7Z3Y7 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC31.62■■■□□ 2.65
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms