Protein–RNA interactions for Protein: Q6UXN2

TREML4, Trem-like transcript 4 protein, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREML4Q6UXN2 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TREML4Q6UXN2 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC18.83■□□□□ 0.6
TREML4Q6UXN2 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TREML4Q6UXN2 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TREML4Q6UXN2 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TREML4Q6UXN2 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
TREML4Q6UXN2 UNC93B8-201ENST00000511903 705 ntBASIC18.82■□□□□ 0.6
TREML4Q6UXN2 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TREML4Q6UXN2 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.82■□□□□ 0.6
TREML4Q6UXN2 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TREML4Q6UXN2 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TREML4Q6UXN2 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TREML4Q6UXN2 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TREML4Q6UXN2 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC18.81■□□□□ 0.6
TREML4Q6UXN2 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TREML4Q6UXN2 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TREML4Q6UXN2 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TREML4Q6UXN2 AC087393.1-201ENST00000582896 145 ntBASIC18.81■□□□□ 0.6
TREML4Q6UXN2 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TREML4Q6UXN2 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TREML4Q6UXN2 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TREML4Q6UXN2 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TREML4Q6UXN2 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TREML4Q6UXN2 LINC00543-201ENST00000567234 1845 ntBASIC18.8■□□□□ 0.6
TREML4Q6UXN2 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TREML4Q6UXN2 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TREML4Q6UXN2 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TREML4Q6UXN2 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.8■□□□□ 0.6
TREML4Q6UXN2 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TREML4Q6UXN2 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC18.8■□□□□ 0.6
TREML4Q6UXN2 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TREML4Q6UXN2 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.79■□□□□ 0.6
TREML4Q6UXN2 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
TREML4Q6UXN2 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TREML4Q6UXN2 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TREML4Q6UXN2 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TREML4Q6UXN2 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.79■□□□□ 0.6
TREML4Q6UXN2 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TREML4Q6UXN2 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TREML4Q6UXN2 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.78■□□□□ 0.6
TREML4Q6UXN2 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TREML4Q6UXN2 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
TREML4Q6UXN2 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TREML4Q6UXN2 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TREML4Q6UXN2 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC18.77■□□□□ 0.6
TREML4Q6UXN2 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TREML4Q6UXN2 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC18.77■□□□□ 0.6
TREML4Q6UXN2 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TREML4Q6UXN2 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TREML4Q6UXN2 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TREML4Q6UXN2 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.77■□□□□ 0.6
TREML4Q6UXN2 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TREML4Q6UXN2 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.77■□□□□ 0.6
TREML4Q6UXN2 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TREML4Q6UXN2 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC18.76■□□□□ 0.59
TREML4Q6UXN2 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.76■□□□□ 0.59
TREML4Q6UXN2 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TREML4Q6UXN2 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TREML4Q6UXN2 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TREML4Q6UXN2 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TREML4Q6UXN2 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TREML4Q6UXN2 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TREML4Q6UXN2 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TREML4Q6UXN2 AC012676.1-201ENST00000574705 1949 ntBASIC18.76■□□□□ 0.59
TREML4Q6UXN2 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.76■□□□□ 0.59
TREML4Q6UXN2 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TREML4Q6UXN2 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TREML4Q6UXN2 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TREML4Q6UXN2 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TREML4Q6UXN2 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
TREML4Q6UXN2 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TREML4Q6UXN2 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.75■□□□□ 0.59
TREML4Q6UXN2 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TREML4Q6UXN2 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.75■□□□□ 0.59
TREML4Q6UXN2 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
TREML4Q6UXN2 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.75■□□□□ 0.59
TREML4Q6UXN2 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
TREML4Q6UXN2 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TREML4Q6UXN2 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TREML4Q6UXN2 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
TREML4Q6UXN2 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
TREML4Q6UXN2 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC18.74■□□□□ 0.59
TREML4Q6UXN2 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TREML4Q6UXN2 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TREML4Q6UXN2 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TREML4Q6UXN2 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC18.74■□□□□ 0.59
TREML4Q6UXN2 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TREML4Q6UXN2 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TREML4Q6UXN2 TSPY9P-201ENST00000440215 945 ntBASIC18.74■□□□□ 0.59
TREML4Q6UXN2 TSPY11P-201ENST00000442607 1045 ntBASIC18.74■□□□□ 0.59
TREML4Q6UXN2 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TREML4Q6UXN2 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.74■□□□□ 0.59
TREML4Q6UXN2 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
TREML4Q6UXN2 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.74■□□□□ 0.59
TREML4Q6UXN2 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TREML4Q6UXN2 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TREML4Q6UXN2 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TREML4Q6UXN2 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TREML4Q6UXN2 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TREML4Q6UXN2 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms