Protein–RNA interactions for Protein: P80188

LCN2, Neutrophil gelatinase-associated lipocalin, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2P80188 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LCN2P80188 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LCN2P80188 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.32■□□□□ 0.68
LCN2P80188 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.32■□□□□ 0.68
LCN2P80188 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.32■□□□□ 0.68
LCN2P80188 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.32■□□□□ 0.68
LCN2P80188 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LCN2P80188 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LCN2P80188 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LCN2P80188 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LCN2P80188 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
LCN2P80188 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
LCN2P80188 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.3■□□□□ 0.68
LCN2P80188 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.3■□□□□ 0.68
LCN2P80188 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
LCN2P80188 DUSP8P4-201ENST00000399538 1761 ntBASIC19.29■□□□□ 0.68
LCN2P80188 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LCN2P80188 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.29■□□□□ 0.68
LCN2P80188 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.29■□□□□ 0.68
LCN2P80188 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.29■□□□□ 0.68
LCN2P80188 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
LCN2P80188 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LCN2P80188 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.28■□□□□ 0.68
LCN2P80188 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LCN2P80188 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
LCN2P80188 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.28■□□□□ 0.68
LCN2P80188 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.28■□□□□ 0.68
LCN2P80188 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.28■□□□□ 0.68
LCN2P80188 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.28■□□□□ 0.68
LCN2P80188 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.28■□□□□ 0.68
LCN2P80188 MIR6724-1-201ENST00000616420 92 ntBASIC19.28■□□□□ 0.68
LCN2P80188 MIR6724-2-201ENST00000616483 92 ntBASIC19.28■□□□□ 0.68
LCN2P80188 MIR6724-4-201ENST00000617390 92 ntBASIC19.28■□□□□ 0.68
LCN2P80188 MIR6724-3-201ENST00000622482 92 ntBASIC19.28■□□□□ 0.68
LCN2P80188 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
LCN2P80188 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
LCN2P80188 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
LCN2P80188 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
LCN2P80188 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LCN2P80188 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LCN2P80188 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LCN2P80188 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.27■□□□□ 0.68
LCN2P80188 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LCN2P80188 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.27■□□□□ 0.68
LCN2P80188 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.27■□□□□ 0.68
LCN2P80188 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.27■□□□□ 0.68
LCN2P80188 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LCN2P80188 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LCN2P80188 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.27■□□□□ 0.68
LCN2P80188 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LCN2P80188 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
LCN2P80188 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LCN2P80188 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LCN2P80188 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
LCN2P80188 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LCN2P80188 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.26■□□□□ 0.67
LCN2P80188 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.26■□□□□ 0.67
LCN2P80188 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.26■□□□□ 0.67
LCN2P80188 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
LCN2P80188 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
LCN2P80188 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LCN2P80188 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.26■□□□□ 0.67
LCN2P80188 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LCN2P80188 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LCN2P80188 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LCN2P80188 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LCN2P80188 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
LCN2P80188 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.25■□□□□ 0.67
LCN2P80188 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.25■□□□□ 0.67
LCN2P80188 AL117332.1-201ENST00000622628 974 ntBASIC19.25■□□□□ 0.67
LCN2P80188 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.25■□□□□ 0.67
LCN2P80188 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LCN2P80188 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LCN2P80188 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LCN2P80188 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.24■□□□□ 0.67
LCN2P80188 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LCN2P80188 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.24■□□□□ 0.67
LCN2P80188 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.24■□□□□ 0.67
LCN2P80188 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.24■□□□□ 0.67
LCN2P80188 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.24■□□□□ 0.67
LCN2P80188 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LCN2P80188 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LCN2P80188 SLC6A10P-202ENST00000431994 2058 ntBASIC19.24■□□□□ 0.67
LCN2P80188 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
LCN2P80188 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
LCN2P80188 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LCN2P80188 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LCN2P80188 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LCN2P80188 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LCN2P80188 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
LCN2P80188 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LCN2P80188 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.23■□□□□ 0.67
LCN2P80188 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.23■□□□□ 0.67
LCN2P80188 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LCN2P80188 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.23■□□□□ 0.67
LCN2P80188 AL356740.2-201ENST00000601559 647 ntBASIC19.23■□□□□ 0.67
LCN2P80188 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
LCN2P80188 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LCN2P80188 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.22■□□□□ 0.67
LCN2P80188 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms