Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AC022616.5-201ENST00000518796 181 ntBASIC22.58■■□□□ 1.21
YBX1P67809 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
YBX1P67809 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
YBX1P67809 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
YBX1P67809 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC22.57■■□□□ 1.2
YBX1P67809 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
YBX1P67809 LSR-205ENST00000427250 1606 ntTSL 2 BASIC22.57■■□□□ 1.2
YBX1P67809 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC22.57■■□□□ 1.2
YBX1P67809 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
YBX1P67809 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.56■■□□□ 1.2
YBX1P67809 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
YBX1P67809 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC22.56■■□□□ 1.2
YBX1P67809 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
YBX1P67809 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC22.56■■□□□ 1.2
YBX1P67809 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC22.56■■□□□ 1.2
YBX1P67809 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
YBX1P67809 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
YBX1P67809 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
YBX1P67809 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
YBX1P67809 AP003733.4-201ENST00000623785 1697 ntBASIC22.55■■□□□ 1.2
YBX1P67809 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
YBX1P67809 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
YBX1P67809 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
YBX1P67809 AC090877.2-201ENST00000558441 1738 ntBASIC22.55■■□□□ 1.2
YBX1P67809 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC22.55■■□□□ 1.2
YBX1P67809 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
YBX1P67809 AL451085.2-201ENST00000605085 799 ntBASIC22.55■■□□□ 1.2
YBX1P67809 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC22.55■■□□□ 1.2
YBX1P67809 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
YBX1P67809 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
YBX1P67809 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
YBX1P67809 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
YBX1P67809 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
YBX1P67809 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
YBX1P67809 KRT18P24-201ENST00000344739 1156 ntBASIC22.54■■□□□ 1.2
YBX1P67809 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
YBX1P67809 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC22.54■■□□□ 1.2
YBX1P67809 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
YBX1P67809 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC22.54■■□□□ 1.2
YBX1P67809 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
YBX1P67809 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC22.53■■□□□ 1.2
YBX1P67809 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
YBX1P67809 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.53■■□□□ 1.2
YBX1P67809 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
YBX1P67809 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
YBX1P67809 AL031848.2-201ENST00000607670 837 ntBASIC22.53■■□□□ 1.2
YBX1P67809 MIR6089-201ENST00000616698 64 ntBASIC22.53■■□□□ 1.2
YBX1P67809 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC22.53■■□□□ 1.2
YBX1P67809 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
YBX1P67809 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC22.53■■□□□ 1.2
YBX1P67809 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.53■■□□□ 1.2
YBX1P67809 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC22.52■■□□□ 1.2
YBX1P67809 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.52■■□□□ 1.2
YBX1P67809 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
YBX1P67809 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
YBX1P67809 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.52■■□□□ 1.2
YBX1P67809 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
YBX1P67809 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC22.52■■□□□ 1.19
YBX1P67809 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
YBX1P67809 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
YBX1P67809 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
YBX1P67809 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
YBX1P67809 SSSCA1-AS1-201ENST00000567594 614 ntBASIC22.51■■□□□ 1.19
YBX1P67809 THA1P-201ENST00000590384 1145 ntBASIC22.51■■□□□ 1.19
YBX1P67809 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
YBX1P67809 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
YBX1P67809 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
YBX1P67809 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
YBX1P67809 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
YBX1P67809 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
YBX1P67809 LINC00543-201ENST00000567234 1845 ntBASIC22.5■■□□□ 1.19
YBX1P67809 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC22.5■■□□□ 1.19
YBX1P67809 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
YBX1P67809 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
YBX1P67809 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC22.5■■□□□ 1.19
YBX1P67809 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
YBX1P67809 PRTG-204ENST00000561292 833 ntTSL 3 BASIC22.5■■□□□ 1.19
YBX1P67809 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.5■■□□□ 1.19
YBX1P67809 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
YBX1P67809 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
YBX1P67809 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
YBX1P67809 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.49■■□□□ 1.19
YBX1P67809 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
YBX1P67809 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
YBX1P67809 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
YBX1P67809 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
YBX1P67809 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.48■■□□□ 1.19
YBX1P67809 MIR4281-201ENST00000580852 62 ntBASIC22.48■■□□□ 1.19
YBX1P67809 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
YBX1P67809 AC004812.2-201ENST00000611079 2094 ntBASIC22.48■■□□□ 1.19
YBX1P67809 TK2-216ENST00000564917 1156 ntTSL 3 BASIC22.47■■□□□ 1.19
YBX1P67809 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
YBX1P67809 AC011551.1-201ENST00000614101 683 ntBASIC22.47■■□□□ 1.19
YBX1P67809 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
YBX1P67809 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC22.47■■□□□ 1.19
YBX1P67809 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
YBX1P67809 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
YBX1P67809 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
YBX1P67809 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
YBX1P67809 HLA-L-211ENST00000482052 1765 ntBASIC22.46■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms