Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC26.25■■□□□ 1.79
USP11P51784 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC26.25■■□□□ 1.79
USP11P51784 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC26.25■■□□□ 1.79
USP11P51784 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC26.25■■□□□ 1.79
USP11P51784 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
USP11P51784 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
USP11P51784 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
USP11P51784 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
USP11P51784 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
USP11P51784 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
USP11P51784 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC26.24■■□□□ 1.79
USP11P51784 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
USP11P51784 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC26.24■■□□□ 1.79
USP11P51784 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC26.24■■□□□ 1.79
USP11P51784 AC004448.1-201ENST00000458332 883 ntBASIC26.24■■□□□ 1.79
USP11P51784 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC26.24■■□□□ 1.79
USP11P51784 SNX5-217ENST00000606557 1087 ntBASIC26.24■■□□□ 1.79
USP11P51784 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC26.24■■□□□ 1.79
USP11P51784 AL022069.1-201ENST00000568025 1636 ntBASIC26.24■■□□□ 1.79
USP11P51784 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC26.24■■□□□ 1.79
USP11P51784 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
USP11P51784 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
USP11P51784 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC26.23■■□□□ 1.79
USP11P51784 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
USP11P51784 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
USP11P51784 STK32C-205ENST00000456004 607 ntTSL 2 BASIC26.23■■□□□ 1.79
USP11P51784 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC26.23■■□□□ 1.79
USP11P51784 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC26.23■■□□□ 1.79
USP11P51784 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
USP11P51784 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
USP11P51784 AL161729.1-201ENST00000604104 1402 ntBASIC26.22■■□□□ 1.79
USP11P51784 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC26.22■■□□□ 1.79
USP11P51784 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
USP11P51784 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC26.22■■□□□ 1.79
USP11P51784 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC26.22■■□□□ 1.79
USP11P51784 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC26.22■■□□□ 1.79
USP11P51784 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC26.22■■□□□ 1.79
USP11P51784 CLTA-210ENST00000540080 989 ntTSL 2 BASIC26.22■■□□□ 1.79
USP11P51784 LSM7-203ENST00000585409 512 ntTSL 2 BASIC26.22■■□□□ 1.79
USP11P51784 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
USP11P51784 TMEM202-AS1-202ENST00000565181 2325 ntBASIC26.21■■□□□ 1.79
USP11P51784 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
USP11P51784 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC26.21■■□□□ 1.79
USP11P51784 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
USP11P51784 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC26.21■■□□□ 1.79
USP11P51784 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
USP11P51784 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
USP11P51784 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC26.21■■□□□ 1.79
USP11P51784 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
USP11P51784 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
USP11P51784 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
USP11P51784 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.79
USP11P51784 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC26.2■■□□□ 1.79
USP11P51784 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
USP11P51784 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
USP11P51784 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
USP11P51784 AL139125.2-201ENST00000623134 1869 ntBASIC26.2■■□□□ 1.78
USP11P51784 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
USP11P51784 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC26.2■■□□□ 1.78
USP11P51784 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC26.2■■□□□ 1.78
USP11P51784 UNC93B8-201ENST00000511903 705 ntBASIC26.2■■□□□ 1.78
USP11P51784 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC26.2■■□□□ 1.78
USP11P51784 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
USP11P51784 CD37-213ENST00000598095 1598 ntTSL 2 BASIC26.2■■□□□ 1.78
USP11P51784 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
USP11P51784 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
USP11P51784 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
USP11P51784 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC26.19■■□□□ 1.78
USP11P51784 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
USP11P51784 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
USP11P51784 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC26.19■■□□□ 1.78
USP11P51784 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC26.19■■□□□ 1.78
USP11P51784 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
USP11P51784 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
USP11P51784 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
USP11P51784 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC26.19■■□□□ 1.78
USP11P51784 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC26.19■■□□□ 1.78
USP11P51784 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC26.18■■□□□ 1.78
USP11P51784 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
USP11P51784 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
USP11P51784 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
USP11P51784 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
USP11P51784 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC26.18■■□□□ 1.78
USP11P51784 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC26.18■■□□□ 1.78
USP11P51784 MIR6722-201ENST00000617286 78 ntBASIC26.18■■□□□ 1.78
USP11P51784 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC26.18■■□□□ 1.78
USP11P51784 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
USP11P51784 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
USP11P51784 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC26.17■■□□□ 1.78
USP11P51784 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC26.17■■□□□ 1.78
USP11P51784 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC26.17■■□□□ 1.78
USP11P51784 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
USP11P51784 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
USP11P51784 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC26.17■■□□□ 1.78
USP11P51784 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
USP11P51784 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
USP11P51784 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
USP11P51784 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
USP11P51784 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
USP11P51784 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC26.16■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms