Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC29.66■■■□□ 2.34
COL15A1P39059 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC29.65■■■□□ 2.34
COL15A1P39059 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
COL15A1P39059 GATM-206ENST00000558336 1522 ntTSL 2 BASIC29.65■■■□□ 2.34
COL15A1P39059 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC29.65■■■□□ 2.34
COL15A1P39059 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC29.65■■■□□ 2.34
COL15A1P39059 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC29.65■■■□□ 2.34
COL15A1P39059 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
COL15A1P39059 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
COL15A1P39059 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
COL15A1P39059 AC004448.1-201ENST00000458332 883 ntBASIC29.64■■■□□ 2.34
COL15A1P39059 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC29.64■■■□□ 2.34
COL15A1P39059 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC29.64■■■□□ 2.34
COL15A1P39059 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC29.64■■■□□ 2.34
COL15A1P39059 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC29.64■■■□□ 2.33
COL15A1P39059 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC29.64■■■□□ 2.33
COL15A1P39059 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC29.63■■■□□ 2.33
COL15A1P39059 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
COL15A1P39059 AC145676.1-201ENST00000514988 2004 ntBASIC29.63■■■□□ 2.33
COL15A1P39059 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC29.63■■■□□ 2.33
COL15A1P39059 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
COL15A1P39059 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC29.63■■■□□ 2.33
COL15A1P39059 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
COL15A1P39059 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
COL15A1P39059 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC29.63■■■□□ 2.33
COL15A1P39059 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC29.62■■■□□ 2.33
COL15A1P39059 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
COL15A1P39059 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
COL15A1P39059 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
COL15A1P39059 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC29.62■■■□□ 2.33
COL15A1P39059 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
COL15A1P39059 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
COL15A1P39059 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC29.61■■■□□ 2.33
COL15A1P39059 AL355001.2-201ENST00000620617 1191 ntBASIC29.61■■■□□ 2.33
COL15A1P39059 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
COL15A1P39059 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
COL15A1P39059 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
COL15A1P39059 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC29.6■■■□□ 2.33
COL15A1P39059 AC105265.2-201ENST00000467189 838 ntBASIC29.59■■■□□ 2.33
COL15A1P39059 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
COL15A1P39059 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC29.59■■■□□ 2.33
COL15A1P39059 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
COL15A1P39059 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC29.58■■■□□ 2.33
COL15A1P39059 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC29.58■■■□□ 2.33
COL15A1P39059 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
COL15A1P39059 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC29.57■■■□□ 2.32
COL15A1P39059 AF213884.3-201ENST00000563833 479 ntBASIC29.57■■■□□ 2.32
COL15A1P39059 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC29.57■■■□□ 2.32
COL15A1P39059 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
COL15A1P39059 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC29.56■■■□□ 2.32
COL15A1P39059 AC092666.2-201ENST00000613287 246 ntBASIC29.56■■■□□ 2.32
COL15A1P39059 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC29.56■■■□□ 2.32
COL15A1P39059 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
COL15A1P39059 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC29.55■■■□□ 2.32
COL15A1P39059 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
COL15A1P39059 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC29.55■■■□□ 2.32
COL15A1P39059 AP001330.3-201ENST00000520123 633 ntBASIC29.55■■■□□ 2.32
COL15A1P39059 GRAMD4P4-201ENST00000613563 1115 ntBASIC29.55■■■□□ 2.32
COL15A1P39059 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC29.55■■■□□ 2.32
COL15A1P39059 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
COL15A1P39059 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
COL15A1P39059 MIR939-201ENST00000401314 82 ntBASIC29.54■■■□□ 2.32
COL15A1P39059 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
COL15A1P39059 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC29.54■■■□□ 2.32
COL15A1P39059 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC29.54■■■□□ 2.32
COL15A1P39059 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC29.54■■■□□ 2.32
COL15A1P39059 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC29.54■■■□□ 2.32
COL15A1P39059 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC29.54■■■□□ 2.32
COL15A1P39059 AC005703.6-201ENST00000623265 1329 ntBASIC29.53■■■□□ 2.32
COL15A1P39059 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
COL15A1P39059 HYI-206ENST00000372434 1025 ntTSL 5 BASIC29.53■■■□□ 2.32
COL15A1P39059 AL136967.2-201ENST00000623968 743 ntBASIC29.53■■■□□ 2.32
COL15A1P39059 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
COL15A1P39059 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
COL15A1P39059 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC29.53■■■□□ 2.32
COL15A1P39059 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
COL15A1P39059 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
COL15A1P39059 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC29.52■■■□□ 2.32
COL15A1P39059 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC29.52■■■□□ 2.32
COL15A1P39059 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC29.52■■■□□ 2.32
COL15A1P39059 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
COL15A1P39059 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC29.52■■■□□ 2.32
COL15A1P39059 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC29.52■■■□□ 2.32
COL15A1P39059 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
COL15A1P39059 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC29.52■■■□□ 2.32
COL15A1P39059 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC29.52■■■□□ 2.32
COL15A1P39059 SF1-220ENST00000626028 704 ntTSL 2 BASIC29.52■■■□□ 2.32
COL15A1P39059 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.32
COL15A1P39059 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
COL15A1P39059 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC29.51■■■□□ 2.31
COL15A1P39059 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
COL15A1P39059 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
COL15A1P39059 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
COL15A1P39059 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
COL15A1P39059 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC29.5■■■□□ 2.31
COL15A1P39059 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
COL15A1P39059 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC29.5■■■□□ 2.31
COL15A1P39059 MIR5787-201ENST00000611784 55 ntBASIC29.5■■■□□ 2.31
COL15A1P39059 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
COL15A1P39059 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC29.49■■■□□ 2.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms