Protein–RNA interactions for Protein: P25336

MSH3, DNA mismatch repair protein MSH3, yeastyeast

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH3P25336 CPR6YLR216C 1116 nt6.62□□□□□ -1.35
MSH3P25336 PSH1YOL054W 1221 nt6.62□□□□□ -1.35
MSH3P25336 MRPS16YPL013C 366 nt6.62□□□□□ -1.35
MSH3P25336 ARL3YPL051W 597 nt6.62□□□□□ -1.35
MSH3P25336 ROG3YFR022W 2202 nt6.62□□□□□ -1.35
MSH3P25336 SRV2YNL138W 1581 nt6.61□□□□□ -1.35
MSH3P25336 YLR345WYLR345W 1530 nt6.61□□□□□ -1.35
MSH3P25336 RIT1YMR283C 1542 nt6.61□□□□□ -1.35
MSH3P25336 CWC21YDR482C 408 nt6.61□□□□□ -1.35
MSH3P25336 DRE2YKR071C 1047 nt6.61□□□□□ -1.35
MSH3P25336 YAL066WYAL066W 309 nt6.61□□□□□ -1.35
MSH3P25336 VPS20YMR077C 666 nt6.61□□□□□ -1.35
MSH3P25336 MCT1YOR221C 1083 nt6.61□□□□□ -1.35
MSH3P25336 YPR114WYPR114W 948 nt6.61□□□□□ -1.35
MSH3P25336 RRP15YPR143W 753 nt6.61□□□□□ -1.35
MSH3P25336 POP4YBR257W 840 nt6.61□□□□□ -1.35
MSH3P25336 ERG1YGR175C 1491 nt6.6□□□□□ -1.35
MSH3P25336 TEC1YBR083W 1461 nt6.6□□□□□ -1.35
MSH3P25336 DUG1YFR044C 1446 nt6.6□□□□□ -1.35
MSH3P25336 ATG7YHR171W 1893 nt6.6□□□□□ -1.35
MSH3P25336 YDL114WYDL114W 927 nt6.6□□□□□ -1.35
MSH3P25336 TIM22YDL217C 624 nt6.6□□□□□ -1.35
MSH3P25336 GIC2YDR309C 1152 nt6.6□□□□□ -1.35
MSH3P25336 YGL258W-AYGL258W-A 234 nt6.6□□□□□ -1.35
MSH3P25336 ERG25YGR060W 930 nt6.6□□□□□ -1.35
MSH3P25336 ERG20YJL167W 1059 nt6.6□□□□□ -1.35
MSH3P25336 NPA3YJR072C 1158 nt6.6□□□□□ -1.35
MSH3P25336 CDC11YJR076C 1248 nt6.6□□□□□ -1.35
MSH3P25336 YKL031WYKL031W 414 nt6.6□□□□□ -1.35
MSH3P25336 YPL102CYPL102C 303 nt6.6□□□□□ -1.35
MSH3P25336 FKH1YIL131C 1455 nt6.6□□□□□ -1.35
MSH3P25336 NUF2YOL069W 1356 nt6.59□□□□□ -1.35
MSH3P25336 CLN2YPL256C 1638 nt6.59□□□□□ -1.35
MSH3P25336 OCA4YCR095C 1089 nt6.59□□□□□ -1.35
MSH3P25336 RPL7AYGL076C 735 nt6.59□□□□□ -1.35
MSH3P25336 YHL018WYHL018W 363 nt6.59□□□□□ -1.35
MSH3P25336 HPM1YIL110W 1134 nt6.59□□□□□ -1.35
MSH3P25336 SUP2tY(GUA)D 75 nt6.59□□□□□ -1.35
MSH3P25336 SUP11tY(GUA)F1 75 nt6.59□□□□□ -1.35
MSH3P25336 SUP6tY(GUA)F2 75 nt6.59□□□□□ -1.35
MSH3P25336 SUP7tY(GUA)J1 75 nt6.59□□□□□ -1.35
MSH3P25336 SUP4tY(GUA)J2 75 nt6.59□□□□□ -1.35
MSH3P25336 SUP5tY(GUA)M1 75 nt6.59□□□□□ -1.35
MSH3P25336 SUP8tY(GUA)M2 75 nt6.59□□□□□ -1.35
MSH3P25336 SUP3tY(GUA)O 75 nt6.59□□□□□ -1.35
MSH3P25336 RSM26YJR101W 801 nt6.59□□□□□ -1.35
MSH3P25336 YNL143CYNL143C 393 nt6.59□□□□□ -1.35
MSH3P25336 YPL068CYPL068C 882 nt6.59□□□□□ -1.35
MSH3P25336 RPL7BYPL198W 735 nt6.59□□□□□ -1.35
MSH3P25336 ECM8YBR076W 1065 nt6.59□□□□□ -1.35
MSH3P25336 MSS1YMR023C 1581 nt6.59□□□□□ -1.35
MSH3P25336 IRS4YKR019C 1848 nt6.59□□□□□ -1.35
MSH3P25336 OXP1YKL215C 3861 nt6.59□□□□□ -1.35
MSH3P25336 KCH1YJR054W 1494 nt6.59□□□□□ -1.36
MSH3P25336 TGL1YKL140W 1647 nt6.58□□□□□ -1.36
MSH3P25336 MAL11YGR289C 1851 nt6.58□□□□□ -1.36
MSH3P25336 YDR282CYDR282C 1245 nt6.58□□□□□ -1.36
MSH3P25336 YIL047C-AYIL047C-A 369 nt6.58□□□□□ -1.36
MSH3P25336 YNR040WYNR040W 771 nt6.58□□□□□ -1.36
MSH3P25336 CPA1YOR303W 1236 nt6.58□□□□□ -1.36
MSH3P25336 DRN1YGR093W 1524 nt6.58□□□□□ -1.36
MSH3P25336 ORC5YNL261W 1440 nt6.58□□□□□ -1.36
MSH3P25336 snR63snR63 255 nt6.57□□□□□ -1.36
MSH3P25336 SNM1YDR478W 597 nt6.57□□□□□ -1.36
MSH3P25336 RHO3YIL118W 696 nt6.57□□□□□ -1.36
MSH3P25336 YIR021W-AYIR021W-A 213 nt6.57□□□□□ -1.36
MSH3P25336 LTO1YNL260C 597 nt6.57□□□□□ -1.36
MSH3P25336 MRPL10YNL284C 969 nt6.57□□□□□ -1.36
MSH3P25336 YNL285WYNL285W 372 nt6.57□□□□□ -1.36
MSH3P25336 VMA4YOR332W 702 nt6.57□□□□□ -1.36
MSH3P25336 YBR056C-BYBR056C-B 159 nt6.57□□□□□ -1.36
MSH3P25336 HIR1YBL008W 2523 nt6.57□□□□□ -1.36
MSH3P25336 ICL1YER065C 1674 nt6.57□□□□□ -1.36
MSH3P25336 SLD2YKL108W 1362 nt6.57□□□□□ -1.36
MSH3P25336 RAD3YER171W 2337 nt6.56□□□□□ -1.36
MSH3P25336 MSN2YMR037C 2115 nt6.56□□□□□ -1.36
MSH3P25336 GUF1YLR289W 1938 nt6.56□□□□□ -1.36
MSH3P25336 RRP9YPR137W 1722 nt6.56□□□□□ -1.36
MSH3P25336 MAD3YJL013C 1548 nt6.56□□□□□ -1.36
MSH3P25336 PRP19YLL036C 1512 nt6.56□□□□□ -1.36
MSH3P25336 YCR100CYCR100C 951 nt6.56□□□□□ -1.36
MSH3P25336 MRPL15YLR312W-A 762 nt6.56□□□□□ -1.36
MSH3P25336 YOR097CYOR097C 528 nt6.56□□□□□ -1.36
MSH3P25336 EPS1YIL005W 2106 nt6.56□□□□□ -1.36
MSH3P25336 GSY2YLR258W 2118 nt6.56□□□□□ -1.36
MSH3P25336 TKL1YPR074C 2043 nt6.55□□□□□ -1.36
MSH3P25336 YDR034C-CYDR034C-C 1317 nt6.55□□□□□ -1.36
MSH3P25336 YLR410W-AYLR410W-A 1317 nt6.55□□□□□ -1.36
MSH3P25336 ATG4YNL223W 1485 nt6.55□□□□□ -1.36
MSH3P25336 YDR029WYDR029W 315 nt6.55□□□□□ -1.36
MSH3P25336 MRT4YKL009W 711 nt6.55□□□□□ -1.36
MSH3P25336 SMA1YPL027W 738 nt6.55□□□□□ -1.36
MSH3P25336 CBP6YBR120C 489 nt6.55□□□□□ -1.36
MSH3P25336 TFG1YGR186W 2208 nt6.55□□□□□ -1.36
MSH3P25336 PYC1YGL062W 3537 nt6.55□□□□□ -1.36
MSH3P25336 AIM6YDL237W 1173 nt6.54□□□□□ -1.36
MSH3P25336 YDR015CYDR015C 240 nt6.54□□□□□ -1.36
MSH3P25336 YGR204C-AYGR204C-A 114 nt6.54□□□□□ -1.36
MSH3P25336 YKL223WYKL223W 333 nt6.54□□□□□ -1.36
MSH3P25336 YML018CYML018C 1182 nt6.54□□□□□ -1.36
Retrieved 100 of 7,029 protein–RNA pairs in 20 ms